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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_006430 and TX73_006435 are separated by 10 nucleotides
TX73_006435 and TX73_006440 are separated by 10 nucleotides
TX73_006440 and TX73_006445 are separated by 36 nucleotides
TX73_006445 and TX73_006450 are separated by 188 nucleotides
TX73_006430: TX73_006430 - urea ABC transporter permease subunit UrtC, at 1,372,556 to 1,373,707
_006430
TX73_006435: TX73_006435 - urea ABC transporter ATP-binding protein UrtD, at 1,373,718 to 1,374,473
_006435
TX73_006440: TX73_006440 - urea ABC transporter ATP-binding subunit UrtE, at 1,374,484 to 1,375,173
_006440
TX73_006445: TX73_006445 - acetamidase/formamidase family protein, at 1,375,210 to 1,376,439
_006445
TX73_006450: TX73_006450 - zinc ribbon domain-containing protein, at 1,376,628 to 1,376,972
_006450
Group
Condition
TX73
_006430
TX73
_006435
TX73
_006440
TX73
_006445
TX73
_006450
carbon source
MDC_bicarb with butyrate and Adenine
-0.1
-0.2
-0.5
+0.2
-1.3
carbon source
Azelaic (C); anaerobic
+0.0
-0.2
-0.1
-0.2
-0.5
carbon source
L-Malic (C); anaerobic
+0.0
-0.0
-0.1
-0.2
-0.6
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.0
+0.4
-0.4
-0.6
-0.3
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.1
+0.3
-0.2
-0.4
-0.3
sulfur source
sodium isethionate sulfur source
-0.1
-0.1
-0.6
-0.2
+0.4
survival
starvation expt 3; 7 days; outgrowth in CAAc
-0.0
+0.0
-0.4
+0.2
-0.4
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.0
-0.3
+0.1
-0.3
+0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.3
+0.3
-0.6
-0.2
+0.4
carbon source
MDC_bicarb with butyrate
-0.1
-0.0
-0.7
+0.1
+0.4
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
-0.2
+0.6
-0.4
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.0
+0.2
-0.4
-0.3
+0.3
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
+0.0
+0.2
+0.3
-0.1
-0.7
sulfur source
NFM with pyruvate
+0.5
+0.3
-0.8
-0.0
-0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.2
+0.2
+0.0
-0.4
-0.2
carbon source
Butyric Acid (C); anaerobic
+0.1
+0.3
-0.1
+0.3
-0.6
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.1
+0.0
-0.5
+0.1
+0.4
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.3
-0.0
+0.2
-0.1
-0.4
carbon source
MDC_bicarb with butyrate and Adenine
+0.2
+0.2
+0.0
+0.4
-0.7
sulfur source
NFM with succinate
-0.1
-0.3
+0.1
+0.1
+0.3
carbon source dark aerobic
PM with succinate aerobic in dark
+0.3
-0.1
-0.3
+0.1
+0.4
sulfur source control
Dimethyl sulfide sulfur source
+0.1
-0.2
+0.2
-0.2
+0.4
carbon source
PM with succinate and Sodium Formate anaerobic with light
+0.2
+0.0
-0.1
-0.3
+0.6
stress
PM_argon75_N2O25 butyrate and nitrate 0.1 mM
+0.1
+0.1
+0.3
-0.3
+0.3
sulfur source control
sulfur source control
-0.2
+0.1
+0.3
+0.2
+0.5
sulfur source
ethyl methyl sulfide sulfur source
+0.1
+0.2
+0.2
-0.1
+0.6
sulfur source
ethyl methyl sulfide sulfur source
+0.1
+0.2
+0.3
-0.0
+0.4
sulfur source
Thiamine HCl sulfur source
+0.4
+0.0
+0.2
-0.1
+0.4
sulfur source
Thiamine HCl sulfur source
+0.1
+0.3
+0.6
+0.2
-0.0
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
+0.1
-0.2
+0.4
+0.4
+0.6
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