Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_005990 and TX73_005995 overlap by 1 nucleotidesTX73_005995 and TX73_006000 are separated by 25 nucleotidesTX73_006000 and TX73_006005 overlap by 4 nucleotidesTX73_006005 and TX73_006010 are separated by 139 nucleotides TX73_005990: TX73_005990 - 50S ribosomal protein L3 N(5)-glutamine methyltransferase, at 1,275,883 to 1,276,905 _005990 TX73_005995: TX73_005995 - molybdenum cofactor biosynthesis protein MoaE, at 1,276,905 to 1,277,372 _005995 TX73_006000: TX73_006000 - molybdopterin converting factor subunit 1, at 1,277,398 to 1,277,649 _006000 TX73_006005: TX73_006005 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 1,277,646 to 1,278,272 _006005 TX73_006010: TX73_006010 - excinuclease ABC subunit UvrC, at 1,278,412 to 1,280,526 _006010
Group Condition TX73_005990 TX73_005995 TX73_006000 TX73_006005 TX73_006010
carbon source 4-Hydroxybenzoate (C) -0.1 -4.6 -6.1 N.D. +0.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.2 -5.6 -5.2 N.D. +0.3
carbon source 4-Hydroxybenzoate (C) +0.1 -5.7 -5.0 N.D. +0.2
carbon source 4-Hydroxybenzoate (C) +0.1 -5.5 -1.9 N.D. -0.9
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.2 -4.0 -4.6 N.D. +0.2
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.1 -2.6 -4.8 N.D. -0.2
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.2 -2.4 -4.6 N.D. +0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 -2.9 -3.4 N.D. -0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 -3.4 -2.3 N.D. +0.0
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.1 -2.2 -3.5 N.D. +0.0
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.3 -2.8 -2.6 N.D. +0.0
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.2 -2.3 -2.5 N.D. -0.0
carbon source 4-Aminobutyric (C); anaerobic -0.0 -1.8 -2.4 N.D. -0.5
carbon source 4-Aminobutyric (C); anaerobic -0.1 -1.6 -1.8 N.D. -0.4
carbon source 4-Aminobutyric (C); anaerobic -0.1 -1.8 -1.6 N.D. -0.3
carbon source 4-Aminobutyric (C); anaerobic -0.1 -1.6 -1.7 N.D. -0.4
survival starvation expt 4; 14 days; outgrowth in CAAc -0.3 +0.4 -0.2 N.D. -2.6
survival starvation expt 1; 14 days; outgrowth in CAAc -0.2 +0.5 +0.1 N.D. -2.8
survival starvation expt 3; 14 days; outgrowth in CAAc -0.3 +0.4 +0.2 N.D. -2.7
survival starvation expt 2; 14 days; outgrowth in CAAc -0.2 +0.3 +0.4 N.D. -2.9
sulfur source NFM with succinate -0.0 -0.9 -1.2 N.D. +0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.0 -0.3 -1.1 N.D. +1.4
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.2 -0.4 -0.2 N.D. +1.4
stress L-Lactate (C) with 10 mM Sodium Chloride +0.3 +0.9 -0.8 N.D. +1.4
stress L-Lactate (C) with 10 mM Sodium Chloride +0.4 +0.8 -0.4 N.D. +1.2
carbon source MDC_bicarb with butyrate +0.1 +1.1 +1.0 N.D. -0.1
carbon source MDC_bicarb with butyrate +0.1 +1.2 +1.2 N.D. +0.1
sulfur source NFM with pyruvate +0.4 +0.8 +1.0 N.D. +0.6
carbon source MDC_bicarb with butyrate +0.1 +1.3 +1.3 N.D. +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.5 +0.9 +0.7 N.D. +1.5
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