Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_005905 and TX73_005910 are separated by 144 nucleotidesTX73_005910 and TX73_005915 are separated by 191 nucleotidesTX73_005915 and TX73_005920 overlap by 4 nucleotidesTX73_005920 and TX73_005925 are separated by 35 nucleotides TX73_005905: TX73_005905 - ATP phosphoribosyltransferase regulatory subunit, at 1,257,855 to 1,259,003 _005905 TX73_005910: TX73_005910 - 16S rRNA (uracil(1498)-N(3))-methyltransferase, at 1,259,148 to 1,259,903 _005910 TX73_005915: TX73_005915 - hypothetical protein, at 1,260,095 to 1,260,811 _005915 TX73_005920: TX73_005920 - 4-hydroxybenzoate octaprenyltransferase, at 1,260,808 to 1,261,758 _005920 TX73_005925: TX73_005925 - DUF6101 family protein, at 1,261,794 to 1,262,318 _005925
Group Condition TX73_005905 TX73_005910 TX73_005915 TX73_005920 TX73_005925
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. -0.1 N.D. N.D. -0.7
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. -0.2 N.D. N.D. -0.5
carbon source MDC_bicarb with butyrate and Adenine N.D. -0.5 N.D. N.D. -0.1
carbon source aspen wood chips that have been decomposed by a fungus (C) N.D. -0.1 N.D. N.D. -0.4
carbon source MDC_bicarb with butyrate N.D. -0.3 N.D. N.D. -0.2
carbon source 4-Hydroxybenzoate (C) N.D. -0.2 N.D. N.D. -0.3
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM N.D. -0.2 N.D. N.D. -0.3
survival starvation expt 2; 14 days; outgrowth in CAAc N.D. -0.0 N.D. N.D. -0.4
carbon source MDC_bicarb with butyrate and Adenine N.D. -0.2 N.D. N.D. -0.2
sulfur source control sulfur source control N.D. -0.1 N.D. N.D. -0.3
sulfur source NFM with pyruvate N.D. +0.4 N.D. N.D. -0.6
carbon source Citraconic (C); anaerobic N.D. +0.2 N.D. N.D. -0.4
carbon source MDC_bicarb with butyrate N.D. -0.3 N.D. N.D. +0.2
carbon source 4-Aminobutyric (C); anaerobic N.D. +0.4 N.D. N.D. -0.4
stress PM_argon75_N2O25 with buyrate and 0.1 mM nitrate; in dark N.D. +0.2 N.D. N.D. -0.2
carbon source PM with succinate anaerobic with light N.D. +0.2 N.D. N.D. -0.2
carbon source 4-Aminobutyric (C); anaerobic N.D. +0.4 N.D. N.D. -0.3
stress PM_N2O butyrate and nitrate 0.1 mM N.D. +0.3 N.D. N.D. -0.1
stress PM_argon75_N2O25 with buyrate and 0.1 mM nitrate; in dark N.D. +0.3 N.D. N.D. -0.1
carbon source Fumarate (C); anaerobic N.D. +0.3 N.D. N.D. -0.2
stress PM_argon75_N2O25 butyrate and nitrate 0.1 mM N.D. +0.3 N.D. N.D. -0.1
carbon source Fumarate (C); anaerobic N.D. +0.3 N.D. N.D. -0.1
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark N.D. +0.4 N.D. N.D. -0.0
carbon source 4-Aminobutyric (C); anaerobic N.D. +0.5 N.D. N.D. -0.1
carbon source 4-Aminobutyric (C); anaerobic N.D. +0.4 N.D. N.D. +0.1
sulfur source NFM with succinate N.D. +0.2 N.D. N.D. +0.2
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM N.D. +0.2 N.D. N.D. +0.2
carbon source PM with succinate and Sodium Formate anaerobic with light N.D. +0.2 N.D. N.D. +0.2
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark N.D. +0.4 N.D. N.D. +0.1
sulfur source 2-(Methylthio)ethanol sulfur source N.D. +0.2 N.D. N.D. +0.3
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