Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_005535 and TX73_005540 are separated by 242 nucleotidesTX73_005540 and TX73_005545 are separated by 125 nucleotidesTX73_005545 and TX73_005550 overlap by 8 nucleotidesTX73_005550 and TX73_005555 are separated by 120 nucleotides TX73_005535: TX73_005535 - L-threonylcarbamoyladenylate synthase, at 1,185,154 to 1,186,137 _005535 TX73_005540: TX73_005540 - AraC family transcriptional regulator, at 1,186,380 to 1,187,282 _005540 TX73_005545: TX73_005545 - MFS transporter, at 1,187,408 to 1,188,694 _005545 TX73_005550: TX73_005550 - amidohydrolase family protein, at 1,188,687 to 1,189,589 _005550 TX73_005555: TX73_005555 - tRNA-Pro, at 1,189,710 to 1,189,786 _005555
Group Condition TX73_005535 TX73_005540 TX73_005545 TX73_005550 TX73_005555
carbon source dark aerobic PM with succinate aerobic in dark N.D. -0.0 -0.3 -0.1 N.D.
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM N.D. -0.0 -0.1 -0.3 N.D.
sulfur source 2-(Methylthio)ethanol sulfur source N.D. -0.2 -0.0 -0.1 N.D.
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM N.D. -0.2 +0.0 -0.1 N.D.
sulfur source NFM with pyruvate N.D. +0.2 -0.4 -0.1 N.D.
sulfur source Taurine sulfur source N.D. +0.0 -0.2 -0.1 N.D.
carbon source 4-Hydroxybenzoate (C) N.D. -0.1 +0.1 -0.2 N.D.
survival starvation expt 3; 14 days; outgrowth in CAAc N.D. +0.1 -0.2 -0.1 N.D.
carbon source Citraconic (C); anaerobic N.D. -0.1 -0.1 +0.1 N.D.
stress PM_N2O butyrate and nitrate 0.1 mM N.D. -0.2 +0.1 -0.0 N.D.
sulfur source NFM_No_Mo with acetate trihydrate N.D. -0.1 +0.2 -0.1 N.D.
survival starvation expt 2; 7 days; outgrowth in CAAc N.D. +0.2 -0.1 -0.1 N.D.
carbon source aspen wood chips that have been decomposed by a fungus (C) N.D. +0.1 +0.1 -0.2 N.D.
sulfur source NFM with pyruvate N.D. +0.3 -0.1 -0.1 N.D.
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark N.D. +0.0 -0.1 +0.2 N.D.
sulfur source NFM_No_Mo_Plus_VCl3 with acetate trihydrate N.D. +0.2 -0.0 -0.1 N.D.
coculture dpurH coculture with Glucose and NaCl and NH4Cl N.D. +0.2 +0.1 -0.1 N.D.
carbon source 4-Aminobutyric (C); anaerobic N.D. +0.2 +0.0 -0.1 N.D.
carbon source dark aerobic PM with succinate aerobic in dark N.D. +0.1 -0.1 +0.1 N.D.
carbon source 4-Hydroxybenzoate (C) N.D. +0.3 +0.0 -0.1 N.D.
carbon source MDC_bicarb with butyrate and Adenine N.D. +0.0 +0.2 +0.1 N.D.
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM N.D. +0.2 +0.1 -0.0 N.D.
sulfur source NFM_No_Mo_Plus_VCl3 with acetate trihydrate N.D. +0.1 +0.2 +0.0 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. +0.3 +0.3 -0.1 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. +0.1 +0.2 +0.3 N.D.
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM N.D. +0.2 +0.2 +0.3 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. +0.3 +0.3 +0.1 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. +0.2 +0.4 +0.1 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. +0.5 +0.5 +0.1 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. +0.3 +0.6 +0.2 N.D.
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