Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_005475 and TX73_005480 are separated by 186 nucleotidesTX73_005480 and TX73_005485 are separated by 6 nucleotidesTX73_005485 and TX73_005490 overlap by 4 nucleotidesTX73_005490 and TX73_005495 are separated by 147 nucleotides TX73_005475: TX73_005475 - HD family hydrolase, at 1,176,220 to 1,176,837 _005475 TX73_005480: TX73_005480 - hypothetical protein, at 1,177,024 to 1,177,185 _005480 TX73_005485: TX73_005485 - DNA-3-methyladenine glycosylase I, at 1,177,192 to 1,177,848 _005485 TX73_005490: TX73_005490 - folate-binding protein YgfZ, at 1,177,845 to 1,178,726 _005490 TX73_005495: TX73_005495 - dihydroorotase, at 1,178,874 to 1,180,208 _005495
Group Condition TX73_005475 TX73_005480 TX73_005485 TX73_005490 TX73_005495
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.1 +0.1 -0.0 -4.1 N.D.
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.2 +0.1 -0.0 -3.8 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride -1.6 -1.5 +0.2 +0.1 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride -1.5 -1.0 +0.2 -0.0 N.D.
carbon source dark aerobic PM with butyrate aerobic in dark -0.1 -0.7 +0.0 -1.3 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.2 -1.7 +0.2 -0.2 N.D.
carbon source MDC_bicarb with butyrate -0.7 -1.1 -0.1 +0.1 N.D.
carbon source dark aerobic PM with butyrate aerobic in dark -0.1 -0.5 +0.0 -0.7 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride -1.1 -0.7 -0.0 +0.5 N.D.
carbon source dark aerobic PM with butyrate aerobic in dark -0.1 -0.4 -0.0 -0.7 N.D.
sulfur source NFM with pyruvate -1.0 -0.3 -0.0 +0.1 N.D.
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 -0.4 -0.2 -0.3 N.D.
carbon source MDC_bicarb with butyrate -0.7 -0.3 -0.2 +0.1 N.D.
carbon source MDC_bicarb with butyrate -0.8 -0.2 -0.2 +0.1 N.D.
sulfur source sodium isethionate sulfur source -0.0 -0.9 +0.0 -0.0 N.D.
sulfur source control sulfur source control -0.2 -0.5 -0.2 +0.0 N.D.
carbon source MDC_bicarb with butyrate -0.7 +0.0 -0.2 +0.1 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.3 -0.6 +0.1 +0.1 N.D.
survival starvation expt 3; 14 days; outgrowth in CAAc -0.4 +0.3 -0.2 -0.2 N.D.
carbon source MDC_bicarb with butyrate and Adenine -0.4 -0.4 +0.1 +0.3 N.D.
stress PM_N2O butyrate and nitrate 0.1 mM -0.1 -0.4 -0.2 +0.3 N.D.
sulfur source NFM with pyruvate -1.1 +1.1 -0.2 +0.0 N.D.
sulfur source Dimethylsulfoniopropionate sulfur source -0.4 -0.1 -0.0 +0.3 N.D.
sulfur source Dimethylsulfoniopropionate sulfur source -0.5 +0.2 +0.0 +0.3 N.D.
carbon source Butyric Acid (C); anaerobic -0.3 -0.2 +0.1 +0.4 N.D.
stress PM_N2O butyrate and nitrate 0.1 mM -0.3 +0.3 -0.0 +0.4 N.D.
carbon source 4-Aminobutyric (C); anaerobic -0.2 +0.5 +0.2 +0.1 N.D.
carbon source MDC_bicarb with butyrate and Adenine -0.3 +0.8 +0.0 +0.1 N.D.
sulfur source control sulfur source control -0.2 +0.6 +0.1 +0.1 N.D.
carbon source 4-Hydroxybenzoate (C) +0.1 +0.1 +0.0 +4.3 N.D.
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