Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_005395 and TX73_005400 are separated by 91 nucleotidesTX73_005400 and TX73_005405 are separated by 315 nucleotidesTX73_005405 and TX73_005410 are separated by 173 nucleotidesTX73_005410 and TX73_005415 are separated by 59 nucleotides TX73_005395: TX73_005395 - DUF3096 domain-containing protein, at 1,155,474 to 1,155,629 _005395 TX73_005400: TX73_005400 - pyruvate, phosphate dikinase, at 1,155,721 to 1,158,747 _005400 TX73_005405: TX73_005405 - cell wall hydrolase, at 1,159,063 to 1,160,493 _005405 TX73_005410: TX73_005410 - hypothetical protein, at 1,160,667 to 1,160,990 _005410 TX73_005415: TX73_005415 - carboxylating nicotinate-nucleotide diphosphorylase, at 1,161,050 to 1,161,925 _005415
Group Condition TX73_005395 TX73_005400 TX73_005405 TX73_005410 TX73_005415
sulfur source NFM with pyruvate -1.8 N.D. +0.0 -0.4 N.D.
survival starvation expt 1; 7 days; outgrowth in CAAc -0.9 N.D. -0.3 -0.2 N.D.
sulfur source NFM with pyruvate -1.3 N.D. +0.2 -0.3 N.D.
survival starvation expt 2; 14 days; outgrowth in CAAc -0.9 N.D. -0.3 -0.1 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride -1.5 N.D. +0.1 +0.1 N.D.
carbon source Butyric Acid (C); anaerobic -0.9 N.D. -0.0 -0.2 N.D.
survival starvation expt 4; 14 days; outgrowth in CAAc -0.9 N.D. -0.1 -0.0 N.D.
carbon source Azelaic (C); anaerobic -0.6 N.D. -0.1 -0.4 N.D.
survival outgrowth control starvation outgrowth control in CAAc -0.5 N.D. -0.2 -0.2 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride -1.2 N.D. +0.6 -0.3 N.D.
survival outgrowth control starvation outgrowth control in CAAc -0.4 N.D. -0.3 -0.1 N.D.
survival starvation expt 1; 3 days; outgrowth in CAAc -0.4 N.D. -0.5 -0.0 N.D.
survival starvation expt 3; 7 days; outgrowth in CAAc -0.7 N.D. -0.2 +0.2 N.D.
carbon source MDC_bicarb with butyrate -0.3 N.D. +0.1 -0.6 N.D.
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.3 N.D. -0.4 -0.5 N.D.
stress L-Lactate (C) with 10 mM Sodium Chloride -0.9 N.D. +0.7 -0.3 N.D.
carbon source dark aerobic PM with succinate aerobic in dark +0.3 N.D. -0.0 -0.6 N.D.
sulfur source control sulfur source control -0.4 N.D. -0.2 +0.4 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.4 N.D. +0.2 -0.7 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.5 N.D. +0.2 -0.6 N.D.
carbon source PM with succinate and Sodium Formate anaerobic with light +0.3 N.D. +0.3 -0.4 N.D.
carbon source MDC_bicarb with butyrate +0.3 N.D. +0.3 -0.3 N.D.
sulfur source ethyl methyl sulfide sulfur source -0.3 N.D. +0.2 +0.5 N.D.
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.8 N.D. +0.1 -0.2 N.D.
carbon source dark aerobic PM with succinate aerobic in dark +0.5 N.D. +0.3 -0.1 N.D.
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.4 N.D. +0.4 -0.1 N.D.
sulfur source Dimethylsulfoniopropionate sulfur source +0.2 N.D. +0.3 +0.4 N.D.
carbon source dark aerobic PM with succinate aerobic in dark +0.6 N.D. -0.1 +0.4 N.D.
carbon source PM with succinate and Sodium Formate anaerobic with light +0.1 N.D. +0.7 +0.2 N.D.
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.9 N.D. +0.5 +0.3 N.D.
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