Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_005080 and TX73_005085 overlap by 4 nucleotidesTX73_005085 and TX73_005090 overlap by 20 nucleotidesTX73_005090 and TX73_005095 are separated by 13 nucleotidesTX73_005095 and TX73_005100 are separated by 215 nucleotides TX73_005080: TX73_005080 - branched-chain amino acid ABC transporter permease, at 1,090,400 to 1,091,398 _005080 TX73_005085: TX73_005085 - ABC transporter ATP-binding protein, at 1,091,395 to 1,092,159 _005085 TX73_005090: TX73_005090 - ABC transporter ATP-binding protein, at 1,092,140 to 1,092,853 _005090 TX73_005095: TX73_005095 - HWE histidine kinase domain-containing protein, at 1,092,867 to 1,095,404 _005095 TX73_005100: TX73_005100 - Crp/Fnr family transcriptional regulator, at 1,095,620 to 1,096,405 _005100
Group Condition TX73_005080 TX73_005085 TX73_005090 TX73_005095 TX73_005100
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.6 -0.5 -0.3 -0.0 -0.0
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.8 -0.4 -0.3 +0.1 +0.4
sulfur source NFM with pyruvate +0.2 -0.3 -0.2 -0.1 -0.5
carbon source 4-Hydroxybenzoate (C) -0.3 -0.0 -0.4 +0.1 -0.2
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 -0.1 -0.1 -0.1 -0.3
sulfur source sodium isethionate sulfur source +0.1 +0.2 +0.1 -0.2 -0.5
sulfur source control sulfur source control -0.1 -0.2 -0.1 +0.2 -0.1
sulfur source Sulfoacetic sulfur source -0.1 +0.2 +0.1 -0.0 -0.2
sulfur source NFM with pyruvate +0.4 -1.1 -0.2 +0.4 +0.5
carbon source MDC_bicarb with butyrate and Adenine -0.2 -0.2 +0.2 +0.1 +0.2
survival starvation expt 4; 3 days; outgrowth in CAAc -0.1 -0.2 +0.1 +0.2 +0.1
carbon source dark aerobic PM with succinate aerobic in dark +0.1 -0.2 -0.1 +0.0 +0.4
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.0 +0.1 -0.2 +0.1 +0.3
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.1 +0.1 +0.4 +0.1 -0.1
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.2 +0.1 +0.3 -0.1 +0.0
sulfur source Sulfoacetic sulfur source -0.2 +0.3 +0.2 +0.2 +0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.1 +0.2 -0.2 +0.3 +0.2
carbon source MDC_bicarb with butyrate +0.2 +0.2 -0.0 +0.1 +0.2
carbon source MDC_bicarb with butyrate -0.1 +0.2 +0.1 +0.2 +0.3
carbon source MDC_bicarb with butyrate and Adenine -0.0 +0.1 +0.0 +0.2 +0.3
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.3 -0.1 +0.2 +0.0 +0.2
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.1 +0.2 +0.2 +0.1 +0.2
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.2 +0.2 +0.1 +0.2 +0.0
carbon source MDC_bicarb with butyrate +0.2 +0.1 -0.0 +0.2 +0.3
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM -0.0 -0.0 +0.5 +0.1 +0.2
carbon source PM with succinate and Sodium Formate anaerobic with light +0.0 +0.3 +0.3 +0.0 +0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.3 +0.2 +0.3 +0.2 -0.0
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.1 +0.4 +0.1 +0.1 +0.1
carbon source dark aerobic PM with succinate aerobic in dark +0.2 +0.1 +0.2 +0.2 +0.3
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.3 +0.2 +0.1 +0.2 +0.3
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TX73_005080
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TX73_005085
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TX73_005100
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