Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_003960 and TX73_003965 are separated by 267 nucleotidesTX73_003965 and TX73_003970 are separated by 251 nucleotidesTX73_003970 and TX73_003975 are separated by 15 nucleotidesTX73_003975 and TX73_003980 overlap by 2 nucleotides TX73_003960: TX73_003960 - sensor domain-containing diguanylate cyclase, at 850,516 to 851,457 _003960 TX73_003965: TX73_003965 - IS481 family transposase, at 851,725 to 852,751 _003965 TX73_003970: TX73_003970 - hypothetical protein, at 853,003 to 853,824 _003970 TX73_003975: TX73_003975 - IS3-like element ISRpa2 family transposase, at 853,840 to 855,023 _003975 TX73_003980: TX73_003980 - pentapeptide repeat-containing protein, at 855,022 to 856,413 _003980
Group Condition TX73_003960 TX73_003965 TX73_003970 TX73_003975 TX73_003980
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 +0.1 -1.1 N.D. -0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.0 +0.2 -1.0 N.D. -0.1
carbon source dark aerobic PM with succinate aerobic in dark -0.0 -0.1 -0.2 N.D. -0.3
survival outgrowth control starvation outgrowth control in CAAc -0.2 -0.2 -0.0 N.D. -0.1
carbon source PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM +0.1 -0.1 -0.2 N.D. -0.1
carbon source MDC_bicarb with butyrate and Adenine +0.0 -0.0 -0.4 N.D. +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 +0.1 -0.3 N.D. -0.1
carbon source 4-Hydroxybenzoate (C) -0.2 -0.1 +0.3 N.D. -0.2
sulfur source control sulfur source control -0.1 +0.0 +0.2 N.D. -0.2
carbon source L-Malic (C); anaerobic -0.1 -0.1 +0.2 N.D. -0.1
sulfur source 2-(Methylthio)ethanol sulfur source -0.0 -0.0 +0.2 N.D. -0.2
carbon source Fumarate (C); anaerobic -0.0 -0.1 +0.3 N.D. -0.2
carbon source dark aerobic PM with butyrate aerobic in dark -0.1 -0.1 +0.2 N.D. -0.1
carbon source Butyric Acid (C); anaerobic -0.1 -0.1 +0.3 N.D. -0.1
carbon source dark aerobic PM with succinate aerobic in dark +0.0 -0.2 +0.2 N.D. +0.0
sulfur source control sulfur source control +0.1 +0.1 +0.1 N.D. -0.2
carbon source MDC_bicarb with butyrate and Adenine +0.1 -0.1 +0.4 N.D. -0.2
stress Benzoate (C), sodium fluoride stress -0.0 +0.2 +0.2 N.D. -0.1
sulfur source NFM with pyruvate +0.0 +0.3 +0.2 N.D. -0.2
carbon source MDC_bicarb with butyrate and Adenine +0.1 -0.1 +0.3 N.D. -0.1
carbon source Azelaic (C); anaerobic +0.1 -0.1 +0.3 N.D. -0.0
carbon source dark aerobic PM with succinate aerobic in dark +0.2 +0.1 +0.2 N.D. -0.0
stress PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark -0.0 +0.2 +0.3 N.D. -0.0
sulfur source Taurine sulfur source +0.1 -0.1 +0.4 N.D. +0.0
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.1 -0.0 +0.5 N.D. -0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.3 -0.0 +0.2 N.D. +0.0
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.1 +0.2 +0.2 N.D. +0.1
carbon source 4-Hydroxybenzoate (C) +0.1 -0.0 +0.5 N.D. +0.1
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM -0.0 +0.2 +0.3 N.D. +0.2
sulfur source NFM with pyruvate +0.0 +0.1 +0.4 N.D. +0.3
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TX73_003960
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TX73_003965
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TX73_003975
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TX73_003980
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