Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_003720 and TX73_003725 are separated by 1 nucleotidesTX73_003725 and TX73_003730 are separated by 63 nucleotidesTX73_003730 and TX73_003735 are separated by 11 nucleotidesTX73_003735 and TX73_003740 overlap by 4 nucleotides TX73_003720: TX73_003720 - adenosylcobinamide-phosphate synthase CbiB, at 792,735 to 793,706 _003720 TX73_003725: TX73_003725 - ABC transporter substrate-binding protein, at 793,708 to 794,520 _003725 TX73_003730: TX73_003730 - threonine-phosphate decarboxylase CobD, at 794,584 to 795,573 _003730 TX73_003735: TX73_003735 - ABC transporter ATP-binding protein, at 795,585 to 796,364 _003735 TX73_003740: TX73_003740 - iron ABC transporter permease, at 796,361 to 797,386 _003740
Group Condition TX73_003720 TX73_003725 TX73_003730 TX73_003735 TX73_003740
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. -0.2 N.D. -0.8 -1.2
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. -0.3 N.D. -0.7 -1.0
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. -0.1 N.D. -0.6 -1.3
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM N.D. +0.1 N.D. -0.7 -0.9
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM N.D. +0.1 N.D. -0.7 -0.9
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM N.D. +0.3 N.D. -0.5 -0.9
survival starvation expt 1; 14 days; outgrowth in CAAc N.D. +0.1 N.D. -0.5 -0.6
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM N.D. +0.3 N.D. -0.7 -0.5
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. +0.1 N.D. -0.3 -0.6
monoculture OAcsForEtOH (C); monoculture N.D. +0.1 N.D. -0.3 -0.4
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. +0.2 N.D. -0.2 -0.7
monoculture OAcsForEtOH (C); monoculture N.D. +0.2 N.D. -0.2 -0.4
carbon source MDC_bicarb with butyrate and Adenine N.D. +0.2 N.D. -0.2 -0.3
carbon source MDC_bicarb with butyrate and Adenine N.D. +0.4 N.D. +0.3 -0.1
sulfur source Dimethylsulfoniopropionate sulfur source N.D. -0.1 N.D. +0.4 +0.4
stress PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark N.D. -0.0 N.D. +0.4 +0.4
sulfur source Thiamine HCl sulfur source N.D. +0.0 N.D. +0.2 +0.5
carbon source dark aerobic PM with succinate aerobic in dark N.D. +0.2 N.D. +0.3 +0.2
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM N.D. +0.0 N.D. +0.4 +0.3
sulfur source Thiamine HCl sulfur source N.D. +0.2 N.D. +0.2 +0.4
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM N.D. +0.1 N.D. +0.4 +0.3
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM N.D. +0.3 N.D. +0.2 +0.4
survival starvation expt 2; 7 days; outgrowth in CAAc N.D. +0.2 N.D. +0.4 +0.3
sulfur source NFM with pyruvate N.D. -0.3 N.D. +0.7 +0.6
carbon source MDC_bicarb with butyrate N.D. +0.4 N.D. +0.3 +0.3
sulfur source NFM with pyruvate N.D. +0.3 N.D. +0.5 +0.3
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM N.D. +0.2 N.D. +0.5 +0.4
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark N.D. +0.2 N.D. +0.4 +0.7
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark N.D. +0.3 N.D. +0.6 +0.6
carbon source 4-Hydroxybenzoate (C) N.D. -0.1 N.D. +0.9 +0.7
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