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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_003620 and TX73_003625 are separated by 109 nucleotides
TX73_003625 and TX73_003630 are separated by 179 nucleotides
TX73_003630 and TX73_003635 overlap by 4 nucleotides
TX73_003635 and TX73_003640 are separated by 22 nucleotides
TX73_003620: TX73_003620 - phosphonate ABC transporter substrate-binding protein, at 773,059 to 773,967
_003620
TX73_003625: TX73_003625 - phosphonate ABC transporter ATP-binding protein, at 774,077 to 774,889
_003625
TX73_003630: TX73_003630 - chloramphenicol acetyltransferase, at 775,069 to 775,749
_003630
TX73_003635: TX73_003635 - alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase, at 775,746 to 776,939
_003635
TX73_003640: TX73_003640 - DUF1045 domain-containing protein, at 776,962 to 777,666
_003640
Group
Condition
TX73
_003620
TX73
_003625
TX73
_003630
TX73
_003635
TX73
_003640
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.2
+0.1
-0.4
-0.0
+0.1
carbon source
Butyric Acid (C); anaerobic
+0.2
-0.3
+0.2
-0.1
-0.2
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.2
+0.0
-0.3
+0.3
-0.1
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
-0.4
+0.2
-0.1
+0.1
-0.0
carbon source
Fumarate (C); anaerobic
+0.3
-0.3
+0.0
-0.1
-0.2
stress
Benzoate (C), sodium fluoride stress
-0.2
-0.1
+0.4
+0.1
-0.4
carbon source dark aerobic
PM with succinate aerobic in dark
-0.2
+0.3
-0.5
+0.1
+0.3
survival outgrowth control
starvation outgrowth control in CAAc
+0.3
-0.3
+0.3
-0.0
-0.2
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.1
-0.4
+0.2
+0.0
+0.2
carbon source
MDC_bicarb with butyrate and Adenine
+0.3
+0.1
-0.2
+0.2
-0.0
sulfur source
Dimethylsulfoniopropionate sulfur source
-0.3
+0.1
+0.3
+0.2
+0.1
carbon source
4-Hydroxybenzoate (C)
-0.1
+0.3
+0.3
+0.1
-0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.0
+0.2
+0.7
-0.1
-0.2
carbon source
MDC_bicarb with butyrate
+0.5
+0.1
-0.1
-0.0
+0.1
sulfur source
NFM with pyruvate
+0.1
+0.5
-0.6
+0.0
+0.4
carbon source
MDC_bicarb with butyrate and Adenine
+0.3
-0.3
+0.2
+0.2
+0.2
carbon source
PM with argon and bicarbonate 60 mM and Sodium thiosulfate 30 mM
-0.2
+0.4
+0.2
+0.3
-0.0
sulfur source control
sulfur source control
+0.3
+0.0
+0.4
+0.2
-0.2
stress
Benzoate (C), sodium fluoride stress
+0.2
+0.0
+0.5
+0.1
-0.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
-0.2
+0.3
+0.6
+0.2
-0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.1
+0.2
+0.2
+0.3
+0.2
carbon source
PM with succinate and Sodium Formate anaerobic with light
+0.2
+0.4
-0.0
+0.2
+0.0
carbon source
PM with succinate anaerobic with light
+0.2
+0.2
+0.2
+0.1
+0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
-0.0
+0.9
-0.1
+0.2
sulfur source
Thiamine HCl sulfur source
+0.3
+0.1
+0.3
+0.0
+0.2
sulfur source
NFM_No_Mo with acetate trihydrate
+0.1
+0.2
+0.4
-0.0
+0.3
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.3
+0.3
+0.2
+0.2
+0.1
sulfur source control
sulfur source control
+0.4
+0.3
+0.3
+0.1
+0.1
carbon source
MDC_bicarb with butyrate
+0.3
+0.3
+0.3
+0.2
+0.1
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.3
+0.4
+0.5
+0.2
-0.0
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