Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_003555 and TX73_003560 overlap by 20 nucleotidesTX73_003560 and TX73_003565 overlap by 4 nucleotidesTX73_003565 and TX73_003570 are separated by 20 nucleotidesTX73_003570 and TX73_003575 overlap by 1 nucleotides TX73_003555: TX73_003555 - pyridoxamine 5'-phosphate oxidase family protein, at 763,122 to 763,769 _003555 TX73_003560: TX73_003560 - phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN, at 763,750 to 764,334 _003560 TX73_003565: TX73_003565 - alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase, at 764,331 to 765,485 _003565 TX73_003570: TX73_003570 - phosphonate C-P lyase system protein PhnL, at 765,506 to 766,216 _003570 TX73_003575: TX73_003575 - phosphonate C-P lyase system protein PhnK, at 766,216 to 767,034 _003575
Group Condition TX73_003555 TX73_003560 TX73_003565 TX73_003570 TX73_003575
sulfur source NFM with pyruvate -0.6 +0.4 -0.0 -0.4 -1.1
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.5 -0.3 -0.3 +0.1 -0.5
survival starvation expt 4; 14 days; outgrowth in CAAc -0.2 -0.2 +0.3 +0.1 -0.5
carbon source Fumarate (C); anaerobic -0.1 -0.0 +0.2 +0.4 -0.5
carbon source Butyric Acid (C); anaerobic -0.1 -0.4 +0.5 +0.3 -0.3
survival outgrowth control starvation outgrowth control in CAAc -0.3 +0.1 +0.1 +0.3 -0.3
carbon source 4-Aminobutyric (C); anaerobic -0.2 +0.2 +0.3 +0.1 -0.3
sulfur source Thiamine HCl sulfur source +0.2 -0.4 -0.2 +0.4 +0.1
carbon source L-Malic (C); anaerobic -0.1 +0.2 +0.1 +0.4 -0.4
stress PM_N2O butyrate and nitrate 0.1 mM +0.2 +0.4 +0.1 -0.2 -0.4
stress PM_N2O butyrate and nitrate 0.1 mM +0.2 +0.6 -0.1 -0.2 -0.3
sulfur source control sulfur source control +0.0 -0.4 +0.3 +0.1 +0.2
stress PM_N2O butyrate and nitrate 0.1 mM -0.0 +0.5 +0.1 -0.1 -0.2
stress PM_N2O butyrate and nitrate 0.1 mM +0.1 +0.6 -0.0 -0.0 -0.3
survival starvation expt 2; 3 days; outgrowth in CAAc -0.2 -0.2 +0.3 +0.4 +0.1
survival starvation expt 1; 14 days; outgrowth in CAAc -0.0 +0.1 +0.3 +0.4 -0.3
carbon source MDC_bicarb with butyrate and Adenine -0.2 +0.7 +0.1 -0.0 -0.0
sulfur source sodium isethionate sulfur source +0.3 -0.5 +0.0 +0.3 +0.3
carbon source 4-Hydroxybenzoate (C) +0.1 +0.4 +0.1 +0.2 -0.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.1 +0.7 +0.1 -0.1 -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride +0.0 -0.3 +0.5 +0.7 -0.2
stress PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark -0.0 +0.3 +0.4 -0.2 +0.4
carbon source MDC_bicarb with butyrate and Adenine +0.3 +0.1 +0.3 +0.3 -0.1
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 +0.3 -0.3 +0.7 +0.4
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.2 +0.5 +0.2 +0.1 -0.0
carbon source dark aerobic PM with succinate aerobic in dark -0.0 +0.3 +0.4 +0.4 +0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.1 +0.9 +0.1 +0.1 +0.0
sulfur source NFM with pyruvate -0.2 +0.3 +0.0 +0.7 +0.6
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.0 +0.6 +0.5 +0.3 +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.3 +0.5 +0.5 +0.6 -0.2
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