Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 175 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
TX73_003555 and TX73_003560 overlap by 20 nucleotides
TX73_003560 and TX73_003565 overlap by 4 nucleotides
TX73_003565 and TX73_003570 are separated by 20 nucleotides
TX73_003570 and TX73_003575 overlap by 1 nucleotides
TX73_003555: TX73_003555 - pyridoxamine 5'-phosphate oxidase family protein, at 763,122 to 763,769
_003555
TX73_003560: TX73_003560 - phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN, at 763,750 to 764,334
_003560
TX73_003565: TX73_003565 - alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase, at 764,331 to 765,485
_003565
TX73_003570: TX73_003570 - phosphonate C-P lyase system protein PhnL, at 765,506 to 766,216
_003570
TX73_003575: TX73_003575 - phosphonate C-P lyase system protein PhnK, at 766,216 to 767,034
_003575
Group
Condition
TX73
_003555
TX73
_003560
TX73
_003565
TX73
_003570
TX73
_003575
sulfur source
NFM with pyruvate
-0.6
+0.4
-0.0
-0.4
-1.1
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.5
-0.3
-0.3
+0.1
-0.5
survival
starvation expt 4; 14 days; outgrowth in CAAc
-0.2
-0.2
+0.3
+0.1
-0.5
carbon source
Fumarate (C); anaerobic
-0.1
-0.0
+0.2
+0.4
-0.5
carbon source
Butyric Acid (C); anaerobic
-0.1
-0.4
+0.5
+0.3
-0.3
survival outgrowth control
starvation outgrowth control in CAAc
-0.3
+0.1
+0.1
+0.3
-0.3
carbon source
4-Aminobutyric (C); anaerobic
-0.2
+0.2
+0.3
+0.1
-0.3
sulfur source
Thiamine HCl sulfur source
+0.2
-0.4
-0.2
+0.4
+0.1
carbon source
L-Malic (C); anaerobic
-0.1
+0.2
+0.1
+0.4
-0.4
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.2
+0.4
+0.1
-0.2
-0.4
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.2
+0.6
-0.1
-0.2
-0.3
sulfur source control
sulfur source control
+0.0
-0.4
+0.3
+0.1
+0.2
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.0
+0.5
+0.1
-0.1
-0.2
stress
PM_N2O butyrate and nitrate 0.1 mM
+0.1
+0.6
-0.0
-0.0
-0.3
survival
starvation expt 2; 3 days; outgrowth in CAAc
-0.2
-0.2
+0.3
+0.4
+0.1
survival
starvation expt 1; 14 days; outgrowth in CAAc
-0.0
+0.1
+0.3
+0.4
-0.3
carbon source
MDC_bicarb with butyrate and Adenine
-0.2
+0.7
+0.1
-0.0
-0.0
sulfur source
sodium isethionate sulfur source
+0.3
-0.5
+0.0
+0.3
+0.3
carbon source
4-Hydroxybenzoate (C)
+0.1
+0.4
+0.1
+0.2
-0.2
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.1
+0.7
+0.1
-0.1
-0.0
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.0
-0.3
+0.5
+0.7
-0.2
stress
PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark
-0.0
+0.3
+0.4
-0.2
+0.4
carbon source
MDC_bicarb with butyrate and Adenine
+0.3
+0.1
+0.3
+0.3
-0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.1
+0.3
-0.3
+0.7
+0.4
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
+0.2
+0.5
+0.2
+0.1
-0.0
carbon source dark aerobic
PM with succinate aerobic in dark
-0.0
+0.3
+0.4
+0.4
+0.1
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
+0.1
+0.9
+0.1
+0.1
+0.0
sulfur source
NFM with pyruvate
-0.2
+0.3
+0.0
+0.7
+0.6
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.0
+0.6
+0.5
+0.3
+0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.3
+0.5
+0.5
+0.6
-0.2
remove
TX73_003555
plot
remove
TX73_003560
plot
remove
TX73_003565
remove
TX73_003570
plot
remove
TX73_003575
plot