Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_003470 and TX73_003475 overlap by 4 nucleotidesTX73_003475 and TX73_003480 overlap by 4 nucleotidesTX73_003480 and TX73_003485 are separated by 24 nucleotidesTX73_003485 and TX73_003490 are separated by 191 nucleotides TX73_003470: TX73_003470 - 4-hydroxybenzoyl-CoA reductase subunit gamma, at 739,506 to 739,997 _003470 TX73_003475: TX73_003475 - 4-hydroxybenzoyl-CoA reductase subunit alpha, at 739,994 to 742,327 _003475 TX73_003480: TX73_003480 - 4-hydroxybenzoyl-CoA reductase subunit beta, at 742,324 to 743,307 _003480 TX73_003485: TX73_003485 - Crp/Fnr family transcriptional regulator, at 743,332 to 744,057 _003485 TX73_003490: TX73_003490 - Zn-dependent alcohol dehydrogenase, at 744,249 to 745,361 _003490
Group Condition TX73_003470 TX73_003475 TX73_003480 TX73_003485 TX73_003490
carbon source 4-Hydroxybenzoate (C) -7.2 -4.6 -5.1 -4.8 -0.1
carbon source 4-Hydroxybenzoate (C) -6.0 -4.6 -4.5 -3.7 +0.1
carbon source 4-Hydroxybenzoate (C) -2.7 -4.6 -5.3 -3.1 +0.1
sulfur source sodium isethionate sulfur source -0.7 -0.2 -0.0 -0.6 -0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.4 -0.2 -0.2 -0.2 -0.1
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 -0.1 -0.6 -0.0 -0.4
carbon source Citraconic (C); anaerobic -0.4 +0.2 +0.1 -0.6 +0.2
stress L-Lactate (C) with 10 mM Sodium Chloride -0.4 -0.1 -0.1 +0.3 -0.0
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM -0.4 +0.2 +0.1 -0.3 +0.1
carbon source Citraconic (C); anaerobic +0.1 -0.1 -0.2 -0.4 +0.3
carbon source Fumarate (C); anaerobic -0.4 +0.1 -0.0 -0.1 +0.2
carbon source dark aerobic PM with butyrate aerobic in dark -0.2 -0.0 +0.2 -0.3 +0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.4 -0.3 +0.1 -0.1 -0.2
sulfur source Dimethylsulfoniopropionate sulfur source -0.3 +0.1 +0.2 -0.1 +0.2
carbon source Citraconic (C); anaerobic +0.4 -0.0 -0.2 -0.2 +0.3
carbon source L-Leucine (C); anaerobic +0.3 +0.0 +0.1 -0.3 +0.2
carbon source MDC_bicarb with butyrate and Adenine +0.2 -0.0 -0.3 +0.3 +0.1
carbon source MDC_bicarb with butyrate -0.2 +0.2 +0.2 +0.3 -0.1
carbon source L-Malic (C); anaerobic +0.5 +0.1 +0.1 -0.3 +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.2 -0.0 -0.4 +0.7 +0.0
sulfur source sodium isethionate sulfur source +0.3 +0.2 +0.1 -0.2 +0.1
carbon source aspen wood chips that have been decomposed by a fungus (C) +0.4 -0.1 +0.3 +0.1 +0.1
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.4 -0.0 +0.3 +0.2 -0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.0 +0.2 +0.2 +0.3 +0.1
sulfur source sodium isethionate sulfur source +0.2 +0.1 +0.2 +0.1 +0.3
carbon source Butyric Acid (C); anaerobic +0.4 +0.1 +0.1 +0.2 +0.2
survival starvation expt 2; 3 days; outgrowth in CAAc +0.6 +0.0 -0.0 +0.1 +0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.2 +0.2 +0.3 +0.3 -0.0
sulfur source NFM with pyruvate +0.3 +0.1 +0.2 +0.4 +0.1
sulfur source Thiamine HCl sulfur source +0.5 +0.2 +0.2 +0.3 +0.2
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