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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_002980 and TX73_002985 are separated by 256 nucleotides
TX73_002985 and TX73_002990 are separated by 269 nucleotides
TX73_002990 and TX73_002995 are separated by 182 nucleotides
TX73_002995 and TX73_003000 are separated by 95 nucleotides
TX73_002980: TX73_002980 - polyhydroxyalkanoate depolymerase, at 637,419 to 638,747
_002980
TX73_002985: TX73_002985 - SprT family zinc-dependent metalloprotease, at 639,004 to 639,837
_002985
TX73_002990: TX73_002990 - transglycosylase domain-containing protein, at 640,107 to 642,326
_002990
TX73_002995: TX73_002995 - hypothetical protein, at 642,509 to 642,760
_002995
TX73_003000: TX73_003000 - hypothetical protein, at 642,856 to 643,068
_003000
Group
Condition
TX73
_002980
TX73
_002985
TX73
_002990
TX73
_002995
TX73
_003000
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-1.6
-0.4
-0.5
-0.4
-0.2
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-1.9
-0.5
-0.2
+0.1
-0.0
carbon source
L-Leucine (C); anaerobic
-1.3
-0.0
-0.1
-0.3
-0.6
carbon source
4-Aminobutyric (C); anaerobic
-1.3
-0.2
-0.3
+0.1
-0.6
carbon source
4-Aminobutyric (C); anaerobic
-1.3
-0.3
+0.0
+0.1
-0.5
carbon source
4-Aminobutyric (C); anaerobic
-1.3
-0.4
+0.0
+0.3
-0.5
stress
L-Lactate (C) with 10 mM Sodium Chloride
-1.0
+0.1
-0.4
-0.5
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
-1.0
-0.0
+0.4
-0.4
-0.9
carbon source
4-Aminobutyric (C); anaerobic
-1.3
-0.3
+0.1
+0.4
-0.7
carbon source
4-Hydroxybenzoate (C)
-1.2
+0.0
-1.1
+0.5
+0.1
sulfur source
NFM with pyruvate
-0.5
+0.2
-0.5
-0.3
-0.5
sulfur source
Thiamine HCl sulfur source
-0.7
-0.3
-0.3
+0.1
-0.3
sulfur source
Thiamine HCl sulfur source
-0.5
-0.1
-1.0
+0.1
+0.1
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.6
+0.2
-0.7
+0.0
-0.4
carbon source
acetate trihydrate and Sodium L-Lactate (C)
-0.4
+0.0
-1.2
+0.0
+0.1
carbon source
Citraconic (C); anaerobic
-0.8
+0.2
-0.3
+0.1
-0.6
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.3
+0.2
-0.4
-0.1
-0.8
carbon source
4-Hydroxybenzoate (C)
-1.4
-0.2
+0.1
+0.2
+0.3
carbon source
4-Hydroxybenzoate (C)
-1.4
-0.4
+0.2
+0.1
+0.5
carbon source
MDC_bicarb with butyrate and Adenine
-0.3
-0.0
-0.9
+0.3
-0.1
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
-0.4
-0.5
-0.1
+0.4
-0.3
carbon source dark aerobic
PM with succinate aerobic in dark
-0.1
-0.2
-0.8
+0.1
+0.4
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.6
+0.7
-0.4
-0.1
+0.0
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
-0.3
-0.4
+0.3
+0.5
-0.4
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.3
-0.6
+0.2
+0.5
+0.1
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.2
-0.6
-0.2
+0.6
+0.4
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.2
-0.6
-0.1
+0.5
+0.5
sulfur source
Thiamine HCl sulfur source
-0.6
-0.0
+0.4
-0.1
+0.5
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.5
+0.8
+0.2
+0.1
-0.2
stress
PM_N2O butyrate and nitrate 0.1 mM
-0.1
-0.5
+0.2
+0.5
+0.5
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