Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_002635 and TX73_002640 are separated by 371 nucleotidesTX73_002640 and TX73_002645 are separated by 209 nucleotidesTX73_002645 and TX73_002650 are separated by 342 nucleotidesTX73_002650 and TX73_002655 are separated by 92 nucleotides TX73_002635: TX73_002635 - acetyl-CoA carboxylase carboxyltransferase subunit alpha, at 561,896 to 562,858 _002635 TX73_002640: TX73_002640 - hypothetical protein, at 563,230 to 564,666 _002640 TX73_002645: TX73_002645 - preprotein translocase subunit SecA, at 564,876 to 567,716 _002645 TX73_002650: TX73_002650 - peptidylprolyl isomerase, at 568,059 to 568,994 _002650 TX73_002655: TX73_002655 - DNA mismatch repair protein MutS, at 569,087 to 571,810 _002655
Group Condition TX73_002635 TX73_002640 TX73_002645 TX73_002650 TX73_002655
sulfur source control sulfur source control N.D. -0.1 N.D. -0.2 -0.1
survival starvation expt 1; 3 days; outgrowth in CAAc N.D. -0.3 N.D. -0.1 -0.0
sulfur source control Dimethyl sulfide sulfur source N.D. -0.2 N.D. -0.1 -0.1
sulfur source Sulfoacetic sulfur source N.D. -0.2 N.D. -0.1 -0.0
sulfur source control sulfur source control N.D. +0.1 N.D. -0.3 -0.0
survival starvation expt 3; 7 days; outgrowth in CAAc N.D. -0.2 N.D. +0.1 -0.1
survival starvation expt 1; 7 days; outgrowth in CAAc N.D. -0.2 N.D. +0.1 -0.1
sulfur source NFM_No_Mo with acetate trihydrate N.D. -0.2 N.D. +0.1 -0.0
coculture dpurH coculture with Glucose and NaCl and NH4Cl N.D. -0.1 N.D. +0.2 -0.1
survival starvation expt 4; 7 days; outgrowth in CAAc N.D. -0.0 N.D. +0.2 -0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark N.D. -0.0 N.D. -0.2 +0.2
monoculture OAcsForEtOH (C); monoculture N.D. +0.0 N.D. +0.2 -0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light N.D. +0.2 N.D. -0.2 +0.1
carbon source PM with succinate anaerobic with light N.D. -0.1 N.D. +0.2 +0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark N.D. +0.2 N.D. -0.2 +0.2
carbon source dark aerobic PM with succinate aerobic in dark N.D. +0.1 N.D. -0.1 +0.2
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM N.D. +0.0 N.D. -0.0 +0.3
carbon source aspen wood chips that have been decomposed by a fungus (C) N.D. +0.1 N.D. +0.2 -0.1
carbon source MDC_bicarb with butyrate and Adenine N.D. +0.2 N.D. -0.0 +0.1
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. -0.2 N.D. -0.0 +0.6
carbon source Sebacic (C); anaerobic N.D. +0.0 N.D. +0.2 +0.1
carbon source Citraconic (C); anaerobic N.D. +0.1 N.D. +0.3 +0.0
carbon source PM with succinate and Sodium Formate anaerobic with light N.D. +0.2 N.D. +0.1 +0.1
sulfur source NFM with pyruvate N.D. -0.1 N.D. -0.1 +0.7
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. -0.1 N.D. +0.1 +0.6
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. -0.0 N.D. +0.1 +0.5
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. -0.2 N.D. +0.4 +0.4
sulfur source NFM with pyruvate N.D. -0.1 N.D. +0.0 +0.7
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. +0.0 N.D. +0.2 +0.4
carbon source acetate trihydrate and Sodium L-Lactate (C) N.D. -0.0 N.D. +0.5 +0.5
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