Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_002415 and TX73_002420 are separated by 2 nucleotidesTX73_002420 and TX73_002425 overlap by 1 nucleotidesTX73_002425 and TX73_002430 overlap by 4 nucleotidesTX73_002430 and TX73_002435 are separated by 8 nucleotides TX73_002415: TX73_002415 - AprI/Inh family metalloprotease inhibitor, at 514,701 to 515,384 _002415 TX73_002420: TX73_002420 - 2-hydroxyacid dehydrogenase, at 515,387 to 516,373 _002420 TX73_002425: TX73_002425 - ABC transporter permease, at 516,373 to 517,197 _002425 TX73_002430: TX73_002430 - ABC transporter ATP-binding protein, at 517,194 to 518,024 _002430 TX73_002435: TX73_002435 - ABC transporter substrate-binding protein, at 518,033 to 519,175 _002435
Group Condition TX73_002415 TX73_002420 TX73_002425 TX73_002430 TX73_002435
sulfur source control sulfur source control +0.2 -0.3 +0.0 -0.4 +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.2 -0.1 +0.1 +0.3 -0.3
sulfur source NFM with pyruvate -0.6 -0.2 +0.1 +0.7 +0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.4 -0.3 +0.1 +0.1 -0.1
carbon source PM with succinate and Sodium Formate anaerobic with light +0.2 +0.1 +0.3 -0.3 +0.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.2 +0.0 -0.2 -0.3 +0.9
carbon source dark aerobic PM with butyrate aerobic in dark +0.1 +0.3 +0.3 -0.2 +0.2
carbon source 4-Aminobutyric (C); anaerobic -0.1 +0.0 +0.3 +0.2 +0.2
carbon source 4-Aminobutyric (C); anaerobic -0.1 +0.1 +0.3 +0.2 +0.3
stress PM_N2O butyrate and nitrate 0.1 mM +0.0 -0.0 +0.3 +0.2 +0.5
carbon source dark aerobic PM with succinate aerobic in dark +0.1 +0.2 +0.1 +0.1 +0.3
carbon source 4-Aminobutyric (C); anaerobic -0.1 +0.1 +0.3 +0.3 +0.3
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.3 -0.1 -0.2 +0.0 +0.9
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.2 +0.1 +0.1 +0.0 +0.5
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.2 -0.1 +0.1 +0.1 +0.6
carbon source 4-Aminobutyric (C); anaerobic +0.1 -0.0 +0.3 +0.3 +0.3
carbon source PM with succinate anaerobic with light +0.2 +0.2 +0.2 +0.1 +0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.3 +0.0 -0.1 +0.6 +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.6 +0.0 -0.0 +0.2 +0.1
carbon source dark aerobic PM with succinate aerobic in dark +0.2 +0.1 +0.1 +0.3 +0.3
sulfur source NFM with pyruvate +0.3 +0.3 +0.1 +0.2 +0.2
survival starvation expt 3; 7 days; outgrowth in CAAc +0.2 +0.2 +0.1 +0.3 +0.3
carbon source L-Leucine (C); anaerobic +0.0 +0.2 +0.3 +0.5 +0.3
carbon source MDC_bicarb with butyrate +0.1 -0.1 +0.5 +0.3 +0.4
stress PM_N2O butyrate and nitrate 0.1 mM +0.2 +0.1 +0.2 +0.3 +0.5
stress PM_N2O butyrate and nitrate 0.1 mM +0.2 +0.0 +0.3 +0.4 +0.4
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.1 -0.1 +0.5 +0.4 +0.5
stress PM_N2O butyrate and nitrate 0.1 mM +0.1 +0.1 +0.4 +0.4 +0.5
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.1 +0.1 +0.5 +0.4 +0.6
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.3 +0.1 +0.7 +0.4 +0.5
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TX73_002415
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TX73_002420
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TX73_002430
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TX73_002435
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