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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_002315 and TX73_002320 are separated by 68 nucleotides
TX73_002320 and TX73_002325 are separated by 6 nucleotides
TX73_002325 and TX73_002330 are separated by 119 nucleotides
TX73_002330 and TX73_002335 are separated by 87 nucleotides
TX73_002315: TX73_002315 - rRNA maturation RNase YbeY, at 492,916 to 493,419
_002315
TX73_002320: TX73_002320 - PhoH family protein, at 493,488 to 494,543
_002320
TX73_002325: TX73_002325 - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 494,550 to 495,941
_002325
TX73_002330: TX73_002330 - HAD family hydrolase, at 496,061 to 496,720
_002330
TX73_002335: TX73_002335 - Fur family transcriptional regulator, at 496,808 to 497,239
_002335
Group
Condition
TX73
_002315
TX73
_002320
TX73
_002325
TX73
_002330
TX73
_002335
carbon source
4-Hydroxybenzoate (C)
-3.1
-1.0
-0.4
+0.0
N.D.
survival
starvation expt 3; 14 days; outgrowth in CAAc
-4.3
-0.1
+0.2
+0.0
N.D.
survival
starvation expt 2; 7 days; outgrowth in CAAc
-4.3
+0.0
+0.2
+0.1
N.D.
survival
starvation expt 4; 14 days; outgrowth in CAAc
-4.4
+0.2
+0.3
+0.1
N.D.
survival
starvation expt 1; 7 days; outgrowth in CAAc
-4.0
-0.2
+0.3
+0.1
N.D.
survival
starvation expt 4; 7 days; outgrowth in CAAc
-4.0
-0.0
+0.2
+0.0
N.D.
survival
starvation expt 4; 3 days; outgrowth in CAAc
-3.8
-0.1
+0.1
+0.0
N.D.
survival
starvation expt 2; 3 days; outgrowth in CAAc
-3.5
-0.2
+0.1
-0.1
N.D.
survival
starvation expt 3; 7 days; outgrowth in CAAc
-3.8
-0.1
+0.3
+0.1
N.D.
survival
starvation expt 3; 3 days; outgrowth in CAAc
-3.4
-0.1
+0.0
+0.0
N.D.
survival
starvation expt 2; 14 days; outgrowth in CAAc
-3.8
+0.2
+0.2
+0.0
N.D.
carbon source
4-Hydroxybenzoate (C)
-2.7
-0.2
-0.3
+0.1
N.D.
survival
starvation expt 1; 3 days; outgrowth in CAAc
-3.1
-0.2
+0.1
+0.1
N.D.
survival outgrowth control
starvation outgrowth control in CAAc
-2.9
+0.0
+0.1
+0.0
N.D.
carbon source
4-Hydroxybenzoate (C)
-2.2
-0.4
-0.2
+0.0
N.D.
survival
starvation expt 1; 14 days; outgrowth in CAAc
-3.0
-0.1
+0.3
+0.2
N.D.
carbon source
Azelaic (C); anaerobic
-2.6
-0.1
+0.0
+0.1
N.D.
survival outgrowth control
starvation outgrowth control in CAAc
-2.6
+0.1
+0.0
-0.0
N.D.
survival outgrowth control
starvation outgrowth control in CAAc
-2.7
+0.1
+0.0
+0.0
N.D.
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-2.2
-0.8
+0.5
+0.0
N.D.
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-1.8
-0.7
+0.3
+0.1
N.D.
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-1.9
-0.7
+0.4
+0.1
N.D.
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-1.4
-0.8
+0.4
+0.2
N.D.
carbon source
L-Malic (C); anaerobic
+2.3
+0.3
+0.2
+0.0
N.D.
sulfur source
Thiamine HCl sulfur source
+2.5
+0.2
+0.0
+0.0
N.D.
sulfur source
Thiamine HCl sulfur source
+2.4
+0.3
+0.1
+0.0
N.D.
carbon source
L-Malic (C); anaerobic
+2.4
+0.3
+0.2
-0.0
N.D.
carbon source
Fumarate (C); anaerobic
+2.9
+0.3
+0.2
+0.0
N.D.
carbon source
Fumarate (C); anaerobic
+3.1
+0.4
+0.2
+0.0
N.D.
carbon source
Fumarate (C); anaerobic
+3.1
+0.4
+0.2
-0.0
N.D.
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