Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_002120 and TX73_002125 are separated by 109 nucleotidesTX73_002125 and TX73_002130 are separated by 175 nucleotidesTX73_002130 and TX73_002135 are separated by 76 nucleotidesTX73_002135 and TX73_002140 are separated by 29 nucleotides TX73_002120: TX73_002120 - translational GTPase TypA, at 450,315 to 452,138 _002120 TX73_002125: TX73_002125 - NAD(P)/FAD-dependent oxidoreductase, at 452,248 to 453,516 _002125 TX73_002130: TX73_002130 - GNAT family N-acetyltransferase, at 453,692 to 454,201 _002130 TX73_002135: TX73_002135 - inorganic diphosphatase, at 454,278 to 454,814 _002135 TX73_002140: TX73_002140 - M20 family peptidase, at 454,844 to 456,331 _002140
Group Condition TX73_002120 TX73_002125 TX73_002130 TX73_002135 TX73_002140
monoculture OAcsForEtOH (C); monoculture +0.1 -0.0 -1.1 N.D. -0.0
carbon source dark aerobic PM with butyrate aerobic in dark -0.0 -0.1 -0.8 N.D. -0.0
coculture dpurH coculture with Glucose and NaCl and NH4Cl +0.0 +0.0 -1.0 N.D. +0.0
carbon source dark aerobic PM with butyrate aerobic in dark -0.2 -0.1 -0.6 N.D. -0.0
survival starvation expt 3; 14 days; outgrowth in CAAc -0.2 -0.1 -0.6 N.D. +0.0
coculture dpurH coculture with Glucose and NaCl and NH4Cl +0.1 -0.1 -0.8 N.D. -0.0
carbon source 4-Aminobutyric (C); anaerobic +0.3 -0.1 -0.7 N.D. -0.3
carbon source 4-Aminobutyric (C); anaerobic +0.1 -0.0 -0.6 N.D. -0.3
carbon source 4-Aminobutyric (C); anaerobic +0.2 -0.1 -0.5 N.D. -0.3
sulfur source Thiamine HCl sulfur source +0.2 -0.0 -0.7 N.D. -0.0
coculture dpurH coculture with Glucose and NaCl and NH4Cl +0.2 -0.0 -0.7 N.D. -0.0
sulfur source Dimethylsulfoniopropionate sulfur source +0.2 +0.0 -0.6 N.D. -0.1
monoculture OAcsForEtOH (C); monoculture +0.2 +0.0 -0.7 N.D. +0.0
carbon source 4-Aminobutyric (C); anaerobic +0.3 +0.0 -0.4 N.D. -0.3
monoculture OAcsForEtOH (C); monoculture +0.3 -0.1 -0.6 N.D. +0.0
carbon source MDC_bicarb with butyrate +0.5 -0.3 -0.5 N.D. -0.1
sulfur source NFM_No_Mo_Plus_VCl3 with acetate trihydrate +0.3 -0.1 -0.4 N.D. +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride -0.3 -0.0 +0.4 N.D. +0.2
sulfur source NFM with pyruvate -0.0 -0.2 +0.8 N.D. +0.0
carbon source 4-Hydroxybenzoate (C) -0.1 +0.1 +0.7 N.D. -0.1
sulfur source NFM with pyruvate -0.0 -0.0 +0.9 N.D. +0.0
stress L-Lactate (C) with 10 mM Sodium Chloride -0.3 +0.2 +0.8 N.D. +0.2
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.1 -0.0 +0.8 N.D. -0.1
stress PM_N2O butyrate and nitrate 0.1 mM +0.2 -0.0 +0.8 N.D. -0.0
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.1 +0.0 +0.9 N.D. +0.0
stress PM_N2O butyrate and nitrate 0.1 mM +0.3 -0.1 +1.1 N.D. -0.1
stress PM_N2O butyrate and nitrate 0.1 mM +0.3 -0.0 +1.0 N.D. -0.1
stress PM_N2O butyrate and nitrate 0.1 mM +0.3 -0.1 +1.0 N.D. -0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.3 -0.1 +2.6 N.D. -0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.3 -0.1 +3.0 N.D. -0.1
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