Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_001895 and TX73_001900 are separated by 209 nucleotidesTX73_001900 and TX73_001905 are separated by 221 nucleotidesTX73_001905 and TX73_001910 are separated by 72 nucleotidesTX73_001910 and TX73_001915 are separated by 238 nucleotides TX73_001895: TX73_001895 - hypothetical protein, at 396,636 to 396,998 _001895 TX73_001900: TX73_001900 - RNA polymerase sigma factor RpoH, at 397,208 to 398,107 _001900 TX73_001905: TX73_001905 - RluA family pseudouridine synthase, at 398,329 to 399,303 _001905 TX73_001910: TX73_001910 - hypothetical protein, at 399,376 to 399,711 _001910 TX73_001915: TX73_001915 - tRNA-Glu, at 399,950 to 400,024 _001915
Group Condition TX73_001895 TX73_001900 TX73_001905 TX73_001910 TX73_001915
stress L-Lactate (C) with 10 mM Sodium Chloride -0.2 N.D. -2.0 -0.2 -0.5
stress L-Lactate (C) with 10 mM Sodium Chloride -0.3 N.D. -2.4 +0.2 -0.0
stress L-Lactate (C) with 10 mM Sodium Chloride +0.2 N.D. -2.2 -0.4 -0.1
survival starvation expt 1; 14 days; outgrowth in CAAc -0.1 N.D. -0.5 -0.3 -0.6
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.2 N.D. -0.4 +0.1 -0.8
survival starvation expt 4; 7 days; outgrowth in CAAc +0.1 N.D. -0.6 -0.5 +0.2
carbon source 4-Hydroxybenzoate (C) -0.3 N.D. -0.8 +0.6 -0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.2 N.D. -0.0 -1.0 +0.5
survival starvation expt 3; 7 days; outgrowth in CAAc +0.3 N.D. -0.5 -0.3 +0.2
carbon source 4-Hydroxybenzoate (C) -0.2 N.D. -1.1 +0.9 +0.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light +0.0 N.D. +0.1 -0.8 +0.5
carbon source 4-Hydroxybenzoate (C) +0.0 N.D. -0.5 +0.6 -0.3
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.5 N.D. +0.4 -0.5 -0.1
sulfur source NFM with pyruvate -0.3 N.D. -0.5 +0.6 +0.5
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark -0.1 N.D. -0.2 +0.2 +0.9
carbon source Citraconic (C); anaerobic -0.0 N.D. -0.6 +1.6 -0.3
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark -0.0 N.D. -0.2 +0.3 +0.7
carbon source 4-Aminobutyric (C); anaerobic +0.0 N.D. +0.4 +0.8 -0.3
carbon source 4-Aminobutyric (C); anaerobic +0.0 N.D. +0.5 +0.7 -0.3
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.2 N.D. -0.2 +0.2 +0.7
sulfur source NFM with succinate -0.2 N.D. +0.3 +0.6 +0.3
sulfur source 2-(Methylthio)ethanol sulfur source -0.2 N.D. +0.9 +0.2 +0.3
carbon source Citraconic (C); anaerobic +0.1 N.D. -0.4 +1.9 -0.3
carbon source Fumarate (C); anaerobic -0.0 N.D. +0.6 +0.6 +0.2
carbon source Citraconic (C); anaerobic +0.2 N.D. -0.4 +1.6 +0.0
carbon source 4-Aminobutyric (C); anaerobic +0.1 N.D. +0.4 +0.8 +0.2
sulfur source NFM with succinate -0.2 N.D. +0.3 +0.6 +0.7
carbon source Citraconic (C); anaerobic -0.0 N.D. -0.4 +2.0 -0.0
carbon source PM with succinate anaerobic with light +0.1 N.D. +0.5 +0.7 +0.4
carbon source PM with succinate anaerobic with light +0.2 N.D. +0.5 +0.5 +0.6
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TX73_001895
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TX73_001900
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TX73_001910
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TX73_001915
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