Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_001700 and TX73_001705 overlap by 11 nucleotidesTX73_001705 and TX73_001710 are separated by 51 nucleotidesTX73_001710 and TX73_001715 are separated by 154 nucleotidesTX73_001715 and TX73_001720 are separated by 90 nucleotides TX73_001700: TX73_001700 - radical SAM family heme chaperone HemW, at 354,871 to 356,028 _001700 TX73_001705: TX73_001705 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase, at 356,018 to 356,650 _001705 TX73_001710: TX73_001710 - ribonuclease PH, at 356,702 to 357,415 _001710 TX73_001715: TX73_001715 - heat-inducible transcriptional repressor HrcA, at 357,570 to 358,658 _001715 TX73_001720: TX73_001720 - nucleotide exchange factor GrpE, at 358,749 to 359,372 _001720
Group Condition TX73_001700 TX73_001705 TX73_001710 TX73_001715 TX73_001720
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark N.D. -0.1 -0.1 -1.1 -1.6
survival starvation expt 4; 7 days; outgrowth in CAAc N.D. -0.2 -0.6 -0.9 -0.9
carbon source dark aerobic PM with butyrate aerobic in dark N.D. -0.2 +0.0 -0.6 -1.8
survival starvation expt 3; 7 days; outgrowth in CAAc N.D. -0.2 -0.5 -1.1 -0.3
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark N.D. -0.0 -0.1 -1.0 -0.9
carbon source dark aerobic PM with butyrate aerobic in dark N.D. -0.2 -0.1 -0.7 -1.1
sulfur source Dimethylsulfoniopropionate sulfur source N.D. -0.1 -0.3 -0.2 -1.4
survival starvation expt 2; 7 days; outgrowth in CAAc N.D. -0.2 -0.6 -1.0 -0.3
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. +0.4 -0.1 -2.0 -0.2
survival outgrowth control starvation outgrowth control in CAAc N.D. -0.3 -0.3 -0.2 -1.0
survival starvation expt 1; 14 days; outgrowth in CAAc N.D. -0.2 -0.3 -0.8 -0.4
survival starvation expt 1; 7 days; outgrowth in CAAc N.D. -0.1 -0.6 -1.0 -0.0
carbon source dark aerobic PM with succinate aerobic in dark N.D. +0.0 -0.0 -0.6 -1.1
survival starvation expt 3; 14 days; outgrowth in CAAc N.D. -0.1 -0.3 -0.7 -0.4
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. +0.2 +0.1 -1.9 +0.0
sulfur source NFM_No_Mo with acetate trihydrate N.D. +0.1 -0.1 -0.4 -1.0
carbon source Citraconic (C); anaerobic N.D. -0.3 -0.5 -0.2 -0.5
carbon source PM with Formate and Sodium bicarbonate anaerobic with light N.D. +0.1 -0.4 -1.0 -0.0
survival starvation expt 2; 3 days; outgrowth in CAAc N.D. -0.2 -0.4 -0.4 -0.3
stress L-Lactate (C) with 10 mM Sodium Chloride N.D. +0.4 +0.1 -1.6 +0.2
carbon source MDC_bicarb with butyrate and Adenine N.D. +0.2 -0.2 -0.5 -0.4
carbon source PM with Formate and Sodium bicarbonate anaerobic with light N.D. +0.3 -0.4 -0.9 +0.1
stress PM_N2O butyrate and nitrate 0.1 mM N.D. +0.0 +0.3 -0.0 -1.1
carbon source PM with Formate and Sodium bicarbonate anaerobic with light N.D. +0.1 -0.4 -0.9 +0.5
carbon source 4-Hydroxybenzoate (C) N.D. -0.2 -0.2 -1.0 +0.9
carbon source Butyric Acid (C); anaerobic N.D. +0.1 +0.3 -0.4 -0.5
carbon source MDC_bicarb with butyrate N.D. +0.3 +0.1 -0.8 +0.2
carbon source MDC_bicarb with butyrate N.D. +0.2 +0.2 -0.7 +0.3
stress Benzoate (C), sodium fluoride stress N.D. -0.4 -0.2 +0.4 +0.3
carbon source MDC_bicarb with butyrate N.D. +0.2 +0.3 -0.7 +0.7
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TX73_001700
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TX73_001705
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TX73_001720
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