Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 175 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
TX73_001570 and TX73_001575 are separated by 463 nucleotides
TX73_001575 and TX73_001580 overlap by 23 nucleotides
TX73_001580 and TX73_001585 are separated by 5 nucleotides
TX73_001585 and TX73_001590 are separated by 335 nucleotides
TX73_001570: TX73_001570 - protein-export chaperone SecB, at 331,955 to 332,428
_001570
TX73_001575: TX73_001575 - Tim44/TimA family putative adaptor protein, at 332,892 to 333,599
_001575
TX73_001580: TX73_001580 - murein transglycosylase A, at 333,577 to 335,070
_001580
TX73_001585: TX73_001585 - Smr/MutS family protein, at 335,076 to 335,660
_001585
TX73_001590: TX73_001590 - ATP-dependent protease ATPase subunit HslU, at 335,996 to 337,297
_001590
Group
Condition
TX73
_001570
TX73
_001575
TX73
_001580
TX73
_001585
TX73
_001590
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-2.4
-2.2
+0.1
-0.1
-0.7
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-2.7
-1.4
+0.0
-0.1
-0.7
carbon source
4-Hydroxybenzoate (C)
-3.3
-1.5
-0.1
-0.0
+0.3
carbon source
4-Hydroxybenzoate (C)
-3.6
-0.7
+0.1
+0.1
+0.0
survival
starvation expt 2; 14 days; outgrowth in CAAc
-2.1
-1.0
-0.1
-0.1
-0.6
carbon source
4-Hydroxybenzoate (C)
-3.1
-0.3
+0.1
-0.1
-0.1
sulfur source
NFM_No_Mo_Plus_VCl3 with acetate trihydrate
-2.7
-0.1
+0.0
-0.1
-0.1
carbon source
PM with succinate and Sodium Formate anaerobic with light
-2.6
-0.2
+0.1
-0.1
+0.0
survival
starvation expt 4; 14 days; outgrowth in CAAc
-1.2
-1.1
-0.1
-0.1
-0.2
survival
starvation expt 1; 14 days; outgrowth in CAAc
-1.6
-0.8
-0.0
-0.0
-0.2
carbon source dark aerobic
PM with butyrate aerobic in dark
-2.7
-0.0
+0.1
+0.1
-0.1
carbon source
4-Aminobutyric (C); anaerobic
-1.6
-0.7
-0.1
-0.1
-0.1
survival outgrowth control
starvation outgrowth control in CAAc
-2.5
+0.0
-0.0
+0.2
-0.1
survival
starvation expt 1; 7 days; outgrowth in CAAc
-1.9
-0.5
-0.0
-0.0
-0.0
survival
starvation expt 2; 3 days; outgrowth in CAAc
-2.1
-0.2
-0.1
-0.0
-0.1
coculture
dpurH coculture with Glucose and NaCl and NH4Cl
-2.3
-0.1
-0.0
-0.1
+0.0
stress
PM_argon75_N2O25 with buyrate and 0.1 mM nitrate; in dark
-2.3
-0.1
+0.0
+0.0
-0.1
survival
starvation expt 3; 14 days; outgrowth in CAAc
-0.8
-1.1
-0.0
-0.1
-0.3
survival
starvation expt 2; 7 days; outgrowth in CAAc
-1.5
-0.5
-0.0
-0.1
-0.2
carbon source
Azelaic (C); anaerobic
-2.2
-0.0
-0.1
-0.0
+0.0
sulfur source
2-(Methylthio)ethanol sulfur source
-2.1
-0.3
-0.0
+0.1
-0.0
carbon source
Citraconic (C); anaerobic
-2.3
+0.0
+0.1
-0.3
+0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
-2.1
-0.1
+0.1
-0.0
+0.0
carbon source
Azelaic (C); anaerobic
-2.0
-0.2
-0.0
-0.1
+0.2
carbon source
MDC_bicarb with butyrate
-1.9
+0.2
-0.0
-0.0
-0.1
stress
PM_argon75_N2O25 butyrate and Chloride 0.1 mM
-1.9
+0.4
-0.0
-0.0
-0.1
carbon source dark aerobic
PM with butyrate aerobic in dark
-1.9
+0.2
+0.2
+0.2
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
-2.0
+0.7
+0.2
-0.1
-0.2
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.9
+1.2
+0.2
-0.2
-0.4
stress
L-Lactate (C) with 10 mM Sodium Chloride
-0.9
+1.0
+0.1
+0.1
-0.3
remove
TX73_001570
plot
remove
TX73_001575
plot
remove
TX73_001580
remove
TX73_001585
plot
remove
TX73_001590
plot