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Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_001515 and TX73_001520 are separated by 172 nucleotides
TX73_001520 and TX73_001525 are separated by 27 nucleotides
TX73_001525 and TX73_001530 are separated by 171 nucleotides
TX73_001530 and TX73_001535 are separated by 165 nucleotides
TX73_001515: TX73_001515 - ParB/RepB/Spo0J family partition protein, at 320,346 to 321,236
_001515
TX73_001520: TX73_001520 - ParA family protein, at 321,409 to 322,263
_001520
TX73_001525: TX73_001525 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 322,291 to 322,962
_001525
TX73_001530: TX73_001530 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG, at 323,134 to 325,002
_001530
TX73_001535: TX73_001535 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE, at 325,168 to 326,493
_001535
Group
Condition
TX73
_001515
TX73
_001520
TX73
_001525
TX73
_001530
TX73
_001535
stress
L-Lactate (C) with 10 mM Sodium Chloride
N.D.
N.D.
-1.4
-2.3
-2.4
stress
L-Lactate (C) with 10 mM Sodium Chloride
N.D.
N.D.
-1.2
-2.3
-2.6
stress
L-Lactate (C) with 10 mM Sodium Chloride
N.D.
N.D.
-1.3
-2.3
-2.5
carbon source
4-Hydroxybenzoate (C)
N.D.
N.D.
-0.3
-0.7
-1.4
carbon source
4-Hydroxybenzoate (C)
N.D.
N.D.
-0.5
-0.7
-1.1
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
N.D.
N.D.
-0.7
-0.7
-0.8
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
N.D.
N.D.
-0.7
-0.7
-0.7
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
N.D.
N.D.
-0.6
-0.7
-0.7
stress
PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark
N.D.
N.D.
-0.6
-0.7
-0.7
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
N.D.
N.D.
+0.4
-0.9
-1.1
carbon source
PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM
N.D.
N.D.
-0.1
-0.7
-0.8
carbon source
4-Hydroxybenzoate (C)
N.D.
N.D.
-0.0
-0.5
-1.1
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
N.D.
N.D.
+0.3
-0.9
-0.9
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
N.D.
N.D.
+0.2
-0.8
-0.9
carbon source
4-Aminobutyric (C); anaerobic
N.D.
N.D.
+0.1
-0.8
-0.8
carbon source
Citraconic (C); anaerobic
N.D.
N.D.
+0.3
-0.8
-0.9
carbon source
Citraconic (C); anaerobic
N.D.
N.D.
+0.3
-0.9
-0.9
carbon source
4-Aminobutyric (C); anaerobic
N.D.
N.D.
+0.1
-0.7
-0.8
carbon source
4-Aminobutyric (C); anaerobic
N.D.
N.D.
+0.2
-0.7
-0.8
carbon source
PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM
N.D.
N.D.
+0.3
-0.7
-0.8
carbon source
Citraconic (C); anaerobic
N.D.
N.D.
+0.4
-0.8
-0.8
carbon source
PM with succinate and Sodium Formate anaerobic with light
N.D.
N.D.
+0.2
-0.7
-0.7
carbon source
PM with succinate and Sodium Formate anaerobic with light
N.D.
N.D.
+0.3
-0.7
-0.6
carbon source
Citraconic (C); anaerobic
N.D.
N.D.
+0.5
-0.8
-0.8
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
N.D.
+0.5
-0.5
-0.6
carbon source dark aerobic
PM with succinate aerobic in dark
N.D.
N.D.
+0.7
-0.5
-0.5
sulfur source
2-(Methylthio)ethanol sulfur source
N.D.
N.D.
+0.9
+0.6
+0.6
sulfur source
2-(Methylthio)ethanol sulfur source
N.D.
N.D.
+1.1
+0.7
+0.6
sulfur source
2-(Methylthio)ethanol sulfur source
N.D.
N.D.
+0.9
+0.7
+0.8
sulfur source
2-(Methylthio)ethanol sulfur source
N.D.
N.D.
+1.0
+0.7
+0.8
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