Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_001385 and TX73_001390 are separated by 205 nucleotidesTX73_001390 and TX73_001395 are separated by 313 nucleotidesTX73_001395 and TX73_001400 are separated by 26 nucleotidesTX73_001400 and TX73_001405 are separated by 89 nucleotides TX73_001385: TX73_001385 - MBOAT family protein, at 293,673 to 295,085 _001385 TX73_001390: TX73_001390 - tRNA-Gly, at 295,291 to 295,365 _001390 TX73_001395: TX73_001395 - thioredoxin, at 295,679 to 296,599 _001395 TX73_001400: TX73_001400 - LON peptidase substrate-binding domain-containing protein, at 296,626 to 297,303 _001400 TX73_001405: TX73_001405 - Trm112 family protein, at 297,393 to 297,590 _001405
Group Condition TX73_001385 TX73_001390 TX73_001395 TX73_001400 TX73_001405
carbon source 4-Hydroxybenzoate (C) +0.2 N.D. -0.1 -0.1 -4.4
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 N.D. +0.1 +0.2 -2.9
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.1 N.D. -0.2 +0.2 -2.3
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 N.D. -0.1 -0.1 -1.8
sulfur source NFM_No_Mo with acetate trihydrate +0.0 N.D. -0.1 -0.1 -1.4
sulfur source ethyl methyl sulfide sulfur source -0.0 N.D. +0.1 +0.1 -1.6
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.2 N.D. +0.2 -0.2 -1.1
stress Benzoate (C), sodium fluoride stress -0.1 N.D. -0.4 -0.3 -0.5
carbon source MDC_bicarb with butyrate -0.1 N.D. +0.2 -0.2 -1.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 N.D. +0.1 +0.1 -1.4
survival outgrowth control starvation outgrowth control in CAAc +0.1 N.D. -0.0 -0.0 -1.2
carbon source PM with argon and butyrate 10 mM and Sodium bicarbonate 10 mM +0.0 N.D. +0.1 -0.2 -1.0
sulfur source Taurine sulfur source -0.1 N.D. -0.0 +0.2 -1.0
carbon source MDC_bicarb with butyrate +0.1 N.D. +0.1 -0.2 -0.8
survival starvation expt 1; 7 days; outgrowth in CAAc +0.1 N.D. +0.2 -0.1 -1.0
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark -0.1 N.D. +0.5 +0.5 -0.7
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.0 N.D. +0.5 +0.6 -0.2
survival starvation expt 4; 14 days; outgrowth in CAAc +0.1 N.D. +0.6 +0.4 -0.3
carbon source PM with succinate anaerobic with light -0.1 N.D. +0.0 +0.2 +0.8
survival starvation expt 1; 14 days; outgrowth in CAAc +0.0 N.D. +0.8 +0.4 -0.2
stress PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark -0.1 N.D. +0.0 +0.3 +0.8
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark -0.1 N.D. +0.5 +0.6 +0.1
sulfur source NFM with pyruvate +0.2 N.D. +0.4 +0.2 +0.4
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 N.D. +0.7 +0.3 +0.4
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.2 N.D. +0.9 +0.1 +0.6
stress PM_N2O butyrate and nitrate 0.1 mM +0.0 N.D. +0.3 +0.7 +0.5
survival starvation expt 2; 14 days; outgrowth in CAAc +0.2 N.D. +0.8 +0.4 +0.0
survival starvation expt 3; 14 days; outgrowth in CAAc +0.1 N.D. +0.7 +0.5 +0.3
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark -0.1 N.D. +0.5 +0.5 +0.8
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 N.D. +0.9 +0.1 +1.2
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TX73_001385
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TX73_001390
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TX73_001400
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TX73_001405
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