Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_001380 and TX73_001385 are separated by 68 nucleotidesTX73_001385 and TX73_001390 are separated by 205 nucleotidesTX73_001390 and TX73_001395 are separated by 313 nucleotidesTX73_001395 and TX73_001400 are separated by 26 nucleotides TX73_001380: TX73_001380 - alginate O-acetyltransferase, at 292,504 to 293,604 _001380 TX73_001385: TX73_001385 - MBOAT family protein, at 293,673 to 295,085 _001385 TX73_001390: TX73_001390 - tRNA-Gly, at 295,291 to 295,365 _001390 TX73_001395: TX73_001395 - thioredoxin, at 295,679 to 296,599 _001395 TX73_001400: TX73_001400 - LON peptidase substrate-binding domain-containing protein, at 296,626 to 297,303 _001400
Group Condition TX73_001380 TX73_001385 TX73_001390 TX73_001395 TX73_001400
stress Benzoate (C), sodium fluoride stress -0.0 -0.1 N.D. -0.4 -0.3
carbon source 4-Hydroxybenzoate (C) -0.0 +0.0 N.D. -0.3 -0.4
sulfur source control sulfur source control -0.2 -0.2 N.D. -0.0 -0.2
carbon source MDC_bicarb with butyrate and Adenine -0.2 -0.1 N.D. +0.0 -0.3
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.3 -0.2 N.D. +0.2 -0.2
carbon source 4-Hydroxybenzoate (C) +0.0 +0.1 N.D. -0.2 -0.4
carbon source PM with succinate anaerobic with light -0.3 -0.1 N.D. +0.0 +0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.2 -0.1 N.D. -0.2 +0.2
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM -0.0 -0.2 N.D. +0.1 +0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.3 +0.2 N.D. -0.1 +0.1
stress PM_N2O butyrate and nitrate 0.1 mM -0.1 -0.1 N.D. +0.2 +0.5
stress L-Lactate (C) with 10 mM Sodium Chloride +0.2 -0.2 N.D. +0.1 +0.4
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.2 -0.2 N.D. +0.9 +0.1
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.0 +0.0 N.D. +0.2 +0.3
stress PM_N2O butyrate and nitrate 0.1 mM -0.0 -0.1 N.D. +0.2 +0.5
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.2 -0.1 N.D. +0.7 +0.3
stress L-Lactate (C) with 10 mM Sodium Chloride +0.3 +0.1 N.D. +0.1 +0.2
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.2 -0.1 N.D. +0.9 +0.1
stress PM_N2O butyrate and nitrate 0.1 mM -0.1 -0.1 N.D. +0.4 +0.6
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark -0.1 -0.1 N.D. +0.5 +0.5
stress PM_N2O butyrate and nitrate 0.1 mM -0.1 +0.0 N.D. +0.3 +0.7
sulfur source NFM with pyruvate +0.1 +0.2 N.D. +0.4 +0.2
sulfur source NFM with pyruvate +0.2 +0.2 N.D. +0.2 +0.3
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.0 -0.1 N.D. +0.5 +0.5
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark -0.2 +0.0 N.D. +0.5 +0.6
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark +0.0 -0.1 N.D. +0.5 +0.6
survival starvation expt 4; 14 days; outgrowth in CAAc +0.1 +0.1 N.D. +0.6 +0.4
survival starvation expt 3; 14 days; outgrowth in CAAc +0.1 +0.1 N.D. +0.7 +0.5
survival starvation expt 1; 14 days; outgrowth in CAAc +0.1 +0.0 N.D. +0.8 +0.4
survival starvation expt 2; 14 days; outgrowth in CAAc +0.2 +0.2 N.D. +0.8 +0.4
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