Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_001205 and TX73_001210 are separated by 177 nucleotidesTX73_001210 and TX73_001215 are separated by 748 nucleotidesTX73_001215 and TX73_001220 are separated by 85 nucleotidesTX73_001220 and TX73_001225 are separated by 105 nucleotides TX73_001205: TX73_001205 - CoA ester lyase, at 258,147 to 259,025 _001205 TX73_001210: TX73_001210 - methyl-accepting chemotaxis protein, at 259,203 to 260,894 _001210 TX73_001215: TX73_001215 - 3-isopropylmalate dehydratase small subunit, at 261,643 to 262,248 _001215 TX73_001220: TX73_001220 - metallopeptidase family protein, at 262,334 to 262,747 _001220 TX73_001225: TX73_001225 - hypothetical protein, at 262,853 to 263,200 _001225
Group Condition TX73_001205 TX73_001210 TX73_001215 TX73_001220 TX73_001225
carbon source Citraconic (C); anaerobic -0.8 -0.2 N.D. -0.2 -0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.8 -0.0 N.D. -0.3 -0.0
carbon source Citraconic (C); anaerobic -0.7 -0.2 N.D. -0.1 -0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.7 +0.0 N.D. -0.1 -0.1
carbon source Citraconic (C); anaerobic -0.8 +0.1 N.D. -0.0 -0.2
carbon source 4-Aminobutyric (C); anaerobic -0.1 -0.1 N.D. -0.1 -0.4
carbon source L-Malic (C); anaerobic -0.2 -0.1 N.D. -0.2 -0.2
sulfur source Thiamine HCl sulfur source -0.3 -0.1 N.D. -0.1 -0.2
carbon source dark aerobic PM with succinate aerobic in dark -0.1 +0.0 N.D. -0.2 -0.4
survival starvation expt 2; 3 days; outgrowth in CAAc -0.2 -0.2 N.D. -0.1 -0.0
stress PM_N2O butyrate and nitrate 0.1 mM +0.0 -0.1 N.D. -0.2 -0.2
sulfur source Thiamine HCl sulfur source -0.0 +0.0 N.D. -0.2 -0.3
carbon source 4-Hydroxybenzoate (C) -0.2 +0.1 N.D. -0.2 -0.2
carbon source Citraconic (C); anaerobic -0.6 +0.1 N.D. +0.0 +0.0
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.2 -0.0 N.D. +0.0 -0.2
stress Benzoate (C), sodium fluoride stress -0.2 -0.0 N.D. -0.1 -0.1
survival starvation expt 1; 3 days; outgrowth in CAAc -0.2 -0.1 N.D. -0.1 -0.1
sulfur source ethyl methyl sulfide sulfur source -0.1 -0.2 N.D. -0.1 +0.0
carbon source PM with succinate anaerobic with light -0.2 -0.0 N.D. -0.2 +0.1
carbon source aspen wood chips that have been decomposed by a fungus (C) -0.3 +0.1 N.D. +0.0 -0.1
carbon source acetate trihydrate (C) +0.1 +0.1 N.D. -0.1 -0.1
sulfur source NFM_No_Mo with acetate trihydrate +0.1 -0.0 N.D. +0.1 -0.2
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM -0.2 +0.2 N.D. +0.0 -0.1
stress PM_argon75_N2O25 with buyrate and 0.1 mM Chloride; in dark +0.1 +0.1 N.D. -0.0 -0.2
carbon source Fumarate (C); anaerobic +0.3 -0.0 N.D. -0.1 -0.0
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 +0.1 N.D. -0.1 +0.2
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.3 +0.1 N.D. +0.0 -0.0
sulfur source NFM with pyruvate -0.1 +0.3 N.D. +0.0 +0.3
stress L-Lactate (C) with 10 mM Sodium Chloride -0.1 +0.1 N.D. +0.2 +0.5
sulfur source NFM with pyruvate -0.1 +0.4 N.D. +0.3 +0.4
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TX73_001225
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