Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_001020 and TX73_001025 are separated by 340 nucleotidesTX73_001025 and TX73_001030 are separated by 154 nucleotidesTX73_001030 and TX73_001035 are separated by 59 nucleotidesTX73_001035 and TX73_001040 are separated by 403 nucleotides TX73_001020: TX73_001020 - ABC transporter permease, at 219,374 to 221,944 _001020 TX73_001025: TX73_001025 - Bax inhibitor-1/YccA family protein, at 222,285 to 223,076 _001025 TX73_001030: TX73_001030 - GNAT family N-acetyltransferase, at 223,231 to 223,761 _001030 TX73_001035: TX73_001035 - DUF2794 domain-containing protein, at 223,821 to 224,189 _001035 TX73_001040: TX73_001040 - DUF1223 domain-containing protein, at 224,593 to 225,348 _001040
Group Condition TX73_001020 TX73_001025 TX73_001030 TX73_001035 TX73_001040
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.1 N.D. -0.2 -0.4 -0.5
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark -0.1 N.D. -0.0 -0.5 -0.4
sulfur source Thiamine HCl sulfur source -0.3 N.D. -0.1 -0.3 -0.3
survival starvation expt 2; 3 days; outgrowth in CAAc -0.3 N.D. -0.2 -0.3 -0.0
sulfur source Dimethylsulfoniopropionate sulfur source -0.1 N.D. -0.1 -0.1 -0.4
sulfur source Dimethylsulfoniopropionate sulfur source -0.1 N.D. -0.1 -0.3 -0.2
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM -0.2 N.D. -0.4 -0.1 +0.3
survival starvation expt 3; 14 days; outgrowth in CAAc -0.4 N.D. -0.0 -0.1 +0.3
carbon source MDC_bicarb with butyrate and Adenine -0.1 N.D. -0.2 -0.2 +0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) +0.1 N.D. -0.1 -0.3 +0.3
carbon source 4-Aminobutyric (C); anaerobic -0.0 N.D. -0.1 -0.3 +0.4
carbon source 4-Aminobutyric (C); anaerobic -0.0 N.D. -0.0 -0.3 +0.4
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 N.D. -0.1 -0.3 +0.6
sulfur source NFM with pyruvate -0.0 N.D. -0.2 -0.2 +0.5
survival starvation expt 2; 14 days; outgrowth in CAAc -0.4 N.D. +0.1 +0.1 +0.3
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 N.D. -0.2 -0.3 +0.7
carbon source 4-Aminobutyric (C); anaerobic -0.0 N.D. +0.1 -0.3 +0.4
survival starvation expt 4; 14 days; outgrowth in CAAc -0.3 N.D. +0.2 -0.0 +0.4
sulfur source NFM with pyruvate -0.0 N.D. -0.4 -0.0 +0.7
carbon source Butyric Acid (C); anaerobic +0.1 N.D. +0.1 -0.2 +0.4
carbon source PM with Formate and Sodium bicarbonate anaerobic with light -0.1 N.D. -0.1 -0.3 +0.8
stress Benzoate (C), sodium fluoride stress -0.1 N.D. +0.1 -0.1 +0.6
stress Benzoate (C), sodium fluoride stress -0.1 N.D. +0.0 -0.3 +0.9
stress PM_argon75_N2O25 butyrate and Chloride 0.1 mM +0.1 N.D. -0.1 +0.3 +0.4
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 N.D. +0.1 +0.2 +0.4
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 N.D. +0.2 +0.1 +0.6
stress PM_N2O butyrate and nitrate 0.1 mM +0.0 N.D. -0.1 +0.1 +1.2
stress PM_N2O butyrate and nitrate 0.1 mM +0.0 N.D. +0.1 +0.2 +1.1
stress PM_N2O butyrate and nitrate 0.1 mM +0.1 N.D. -0.0 +0.1 +1.2
stress PM_N2O butyrate and nitrate 0.1 mM +0.1 N.D. -0.0 +0.3 +1.3
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TX73_001020
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