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Protein
Homologs
Fitness for 5 genes in
Rhodopseudomonas palustris CGA009
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
TX73_000830 and TX73_000835 are separated by 129 nucleotides
TX73_000835 and TX73_000840 are separated by 0 nucleotides
TX73_000840 and TX73_000845 are separated by 151 nucleotides
TX73_000845 and TX73_000850 are separated by 138 nucleotides
TX73_000830: TX73_000830 - hypothetical protein, at 179,136 to 179,327
_000830
TX73_000835: TX73_000835 - hypothetical protein, at 179,457 to 179,630
_000835
TX73_000840: TX73_000840 - DMT family transporter, at 179,631 to 180,536
_000840
TX73_000845: TX73_000845 - GTPase ObgE, at 180,688 to 181,749
_000845
TX73_000850: TX73_000850 - glutamate 5-kinase, at 181,888 to 183,018
_000850
Group
Condition
TX73
_000830
TX73
_000835
TX73
_000840
TX73
_000845
TX73
_000850
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.3
-1.3
-0.0
N.D.
N.D.
carbon source dark aerobic
PM with butyrate aerobic in dark
-0.2
-0.5
-0.1
N.D.
N.D.
carbon source dark aerobic
PM with succinate and Sodium Formate aerobic in dark
-0.4
-0.3
+0.0
N.D.
N.D.
carbon source
Azelaic (C); anaerobic
-0.1
-0.5
-0.1
N.D.
N.D.
carbon source
Azelaic (C); anaerobic
-0.2
-0.3
-0.1
N.D.
N.D.
sulfur source
Sulfoacetic sulfur source
+0.1
-0.6
-0.0
N.D.
N.D.
sulfur source
NFM with pyruvate
-0.8
+0.2
+0.1
N.D.
N.D.
stress
Benzoate (C), sodium fluoride stress
+0.1
-0.4
-0.2
N.D.
N.D.
carbon source
Citraconic (C); anaerobic
+0.1
-0.7
+0.0
N.D.
N.D.
sulfur source
NFM_No_Mo with acetate trihydrate
-0.4
+0.1
-0.2
N.D.
N.D.
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.3
-0.8
+0.0
N.D.
N.D.
sulfur source control
sulfur source control
+0.2
-0.5
-0.1
N.D.
N.D.
sulfur source
NFM with pyruvate
-0.5
-0.1
+0.2
N.D.
N.D.
sulfur source
sodium isethionate sulfur source
-0.6
+0.2
-0.1
N.D.
N.D.
carbon source
acetate trihydrate and Sodium L-Lactate (C)
+0.3
-0.7
+0.1
N.D.
N.D.
carbon source
Butyric Acid (C); anaerobic
+0.1
-0.4
-0.0
N.D.
N.D.
carbon source
MDC_bicarb with butyrate
-0.5
+0.2
+0.0
N.D.
N.D.
carbon source
Pimelic (C); anaerobic
+0.2
-0.4
-0.1
N.D.
N.D.
survival
starvation expt 4; 7 days; outgrowth in CAAc
+0.3
-0.5
-0.0
N.D.
N.D.
survival
starvation expt 1; 7 days; outgrowth in CAAc
+0.3
-0.5
-0.0
N.D.
N.D.
carbon source
Pimelic (C); anaerobic
+0.3
-0.5
-0.0
N.D.
N.D.
carbon source
4-Hydroxybenzoate (C)
+0.2
-0.2
-0.2
N.D.
N.D.
carbon source
aspen wood chips that have been decomposed by a fungus (C)
+0.2
-0.4
+0.0
N.D.
N.D.
sulfur source
NFM_No_Mo with acetate trihydrate
-0.2
+0.5
-0.0
N.D.
N.D.
sulfur source
2-(Methylthio)ethanol sulfur source
-0.2
+0.4
+0.1
N.D.
N.D.
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
-0.4
+0.1
+0.7
N.D.
N.D.
carbon source
MDC_bicarb with butyrate and Adenine
+0.3
+0.1
+0.2
N.D.
N.D.
stress
L-Lactate (C) with 10 mM Sodium Chloride
+0.7
-0.0
-0.0
N.D.
N.D.
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.1
-0.0
+0.8
N.D.
N.D.
carbon source
PM with Formate and Sodium bicarbonate anaerobic with light
+0.1
+0.4
+0.8
N.D.
N.D.
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