Fitness for 5 genes in Rhodopseudomonas palustris CGA009

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500 ntTX73_000600 and TX73_000605 overlap by 5 nucleotidesTX73_000605 and TX73_000610 are separated by 25 nucleotidesTX73_000610 and TX73_000615 are separated by 4 nucleotidesTX73_000615 and TX73_000620 are separated by 7 nucleotides TX73_000600: TX73_000600 - GDP-mannose 4,6-dehydratase, at 132,388 to 132,906 _000600 TX73_000605: TX73_000605 - GDP-mannose 4,6-dehydratase, at 132,902 to 133,303 _000605 TX73_000610: TX73_000610 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 133,329 to 133,886 _000610 TX73_000615: TX73_000615 - dTDP-4-dehydrorhamnose reductase, at 133,891 to 134,784 _000615 TX73_000620: TX73_000620 - glucose-1-phosphate thymidylyltransferase RfbA, at 134,792 to 135,661 _000620
Group Condition TX73_000600 TX73_000605 TX73_000610 TX73_000615 TX73_000620
monoculture OAcsForEtOH (C); monoculture -0.1 +0.3 -2.7 -2.0 -0.0
monoculture OAcsForEtOH (C); monoculture +0.0 +0.1 -2.1 -2.0 -0.0
monoculture OAcsForEtOH (C); monoculture +0.1 -0.2 -1.8 -1.9 +0.0
coculture dpurH coculture with Glucose and NaCl and NH4Cl +0.0 +0.1 -1.8 -1.9 +0.0
coculture dpurH coculture with Glucose and NaCl and NH4Cl +0.1 +0.1 -2.6 -1.2 +0.1
stress L-Lactate (C) with 10 mM Sodium Chloride +0.1 -0.1 -1.4 -0.9 -0.2
carbon source dark aerobic PM with succinate aerobic in dark +0.1 +0.4 -1.3 -1.6 +0.2
carbon source dark aerobic PM with succinate aerobic in dark +0.2 +0.4 -1.2 -1.8 +0.2
coculture dpurH coculture with Glucose and NaCl and NH4Cl +0.1 -0.0 -1.0 -1.0 -0.0
sulfur source Thiamine HCl sulfur source +0.2 +0.2 -1.2 -1.4 +0.4
carbon source dark aerobic PM with succinate aerobic in dark +0.3 +0.3 -1.2 -1.2 +0.1
sulfur source Thiamine HCl sulfur source +0.2 -0.0 -1.4 -0.5 +0.2
carbon source MDC_bicarb with butyrate +0.1 -0.0 -0.8 -0.7 +0.1
carbon source dark aerobic PM with butyrate aerobic in dark +0.1 +0.3 -1.3 -0.7 +0.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.2 +0.4 -1.5 -0.7 +0.2
carbon source MDC_bicarb with butyrate +0.2 +0.3 -0.8 -1.0 +0.1
carbon source dark aerobic PM with butyrate aerobic in dark +0.3 -0.1 -0.9 -0.7 +0.2
sulfur source control sulfur source control +0.3 +0.1 -0.7 -0.9 +0.1
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.2 +0.3 -0.6 -1.0 +0.0
survival starvation expt 4; 7 days; outgrowth in CAAc +0.0 +0.0 -0.9 -0.6 +0.3
carbon source dark aerobic PM with succinate aerobic in dark +0.2 +0.4 -0.6 -1.1 +0.1
carbon source MDC_bicarb with butyrate +0.3 +0.2 -0.6 -0.8 +0.2
carbon source dark aerobic PM with succinate aerobic in dark +0.1 +0.1 -0.4 -0.9 +0.3
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.2 +0.3 -0.9 -0.7 +0.4
carbon source dark aerobic PM with succinate aerobic in dark +0.3 +0.3 -0.9 -0.7 +0.4
carbon source MDC_bicarb with butyrate +0.2 +0.5 -0.9 -0.5 +0.3
sulfur source Thiamine HCl sulfur source +0.2 +0.4 -0.5 -0.6 +0.3
stress PM_N2O with buyrate and 0.1 mM bicarb and 0.1 mM nitrate; in dark -0.1 -0.3 +0.6 +0.5 -0.3
stress PM_N2O butyrate and nitrate 0.1 mM -0.1 -0.4 +0.7 +0.6 +0.1
sulfur source Dimethylsulfoniopropionate sulfur source +0.2 +0.4 +0.6 +0.8 +0.2
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TX73_000600
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TX73_000605
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TX73_000615
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TX73_000620
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