Fitness for 5 genes in Rhodopseudomonas palustris CGA009

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 175 experiments or choose conditions or try the comparative fitness browser

500 ntTX73_000540 and TX73_000545 are separated by 15 nucleotidesTX73_000545 and TX73_000550 are separated by 19 nucleotidesTX73_000550 and TX73_000555 are separated by 29 nucleotidesTX73_000555 and TX73_000560 are separated by 40 nucleotides TX73_000540: TX73_000540 - PLP-dependent aminotransferase family protein, at 119,756 to 121,297 _000540 TX73_000545: TX73_000545 - ABC transporter substrate-binding protein, at 121,313 to 122,521 _000545 TX73_000550: TX73_000550 - zinc-binding dehydrogenase, at 122,541 to 123,581 _000550 TX73_000555: TX73_000555 - thiamine pyrophosphate-binding protein, at 123,611 to 125,359 _000555 TX73_000560: TX73_000560 - SDR family NAD(P)-dependent oxidoreductase, at 125,400 to 126,287 _000560
Group Condition TX73_000540 TX73_000545 TX73_000550 TX73_000555 TX73_000560
stress L-Lactate (C) with 10 mM Sodium Chloride -0.9 +0.4 +0.1 -0.2 -0.7
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.5 -0.2 +0.3 +0.0 -0.6
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.8 +0.3 +0.4 -0.2 -0.4
stress L-Lactate (C) with 10 mM Sodium Chloride -0.5 -0.2 +0.4 -0.2 -0.3
carbon source acetate trihydrate and Sodium L-Lactate (C) -0.3 +0.3 +0.4 +0.1 -0.1
sulfur source NFM with pyruvate +0.3 -0.3 -0.1 +0.3 +0.1
carbon source Sebacic (C); anaerobic -0.1 +0.3 +0.3 -0.1 +0.2
survival starvation expt 1; 14 days; outgrowth in CAAc -0.0 -0.0 +0.5 -0.2 +0.4
carbon source 4-Hydroxybenzoate (C) +0.2 +0.3 +0.3 +0.1 -0.2
carbon source dark aerobic PM with succinate aerobic in dark +0.2 +0.4 +0.0 +0.3 -0.1
carbon source MDC_bicarb with butyrate and Adenine +0.2 +0.4 -0.2 +0.2 +0.3
carbon source L-Leucine (C); anaerobic -0.1 +0.4 +0.1 +0.1 +0.3
sulfur source NFM with pyruvate -0.1 +0.1 +0.6 +0.5 -0.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.2 +0.4 -0.2 +0.3 +0.1
carbon source Butyric Acid (C); anaerobic +0.1 +0.3 +0.3 -0.1 +0.3
survival outgrowth control starvation outgrowth control in CAAc +0.2 +0.1 +0.4 +0.0 +0.3
carbon source dark aerobic PM with succinate aerobic in dark +0.3 +0.1 -0.0 +0.4 +0.3
survival starvation expt 2; 3 days; outgrowth in CAAc +0.2 +0.3 +0.1 +0.1 +0.3
sulfur source Dimethylsulfoniopropionate sulfur source +0.3 +0.1 +0.3 +0.1 +0.2
carbon source dark aerobic PM with succinate and Sodium Formate aerobic in dark +0.3 +0.3 +0.2 +0.2 +0.1
survival outgrowth control starvation outgrowth control in CAAc +0.2 +0.5 +0.2 +0.1 +0.1
carbon source MDC_bicarb with butyrate +0.2 +0.4 +0.3 +0.0 +0.2
carbon source Fumarate (C); anaerobic +0.2 +0.2 +0.3 +0.2 +0.2
carbon source L-Malic (C); anaerobic +0.1 +0.4 +0.4 +0.1 +0.1
carbon source dark aerobic PM with succinate aerobic in dark +0.2 +0.6 -0.1 +0.2 +0.1
survival starvation expt 2; 14 days; outgrowth in CAAc +0.2 +0.5 +0.1 -0.0 +0.4
carbon source PM with argon and bicarbonate 20 mM and Sodium thiosulfate 50 mM +0.2 +0.3 +0.2 +0.2 +0.2
carbon source Sebacic (C); anaerobic +0.2 +0.4 +0.3 -0.0 +0.4
sulfur source NFM with succinate +0.3 -0.1 +0.3 +0.3 +0.4
carbon source PM with succinate and Sodium Formate anaerobic with light +0.3 +0.4 +0.2 +0.3 +0.4
remove
TX73_000540
plot		 remove
TX73_000545
plot		 remove
TX73_000550		 remove
TX73_000555
plot		 remove
TX73_000560
plot