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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc04314 and SMc04315 are separated by 100 nucleotides
SMc04315 and SMc04325 are separated by 75 nucleotides
SMc04325 and SMc04326 are separated by 334 nucleotides
SMc04326 and SMc04327 are separated by 38 nucleotides
SMc04314: SMc04314 - hypothetical protein, at 2,132,716 to 2,133,123
SMc04314
SMc04315: SMc04315 - transcriptional regulator, at 2,133,224 to 2,134,072
SMc04315
SMc04325: SMc04325 - methionine synthase I, at 2,134,148 to 2,135,161
SMc04325
SMc04326: SMc04326 - aminotransferase, at 2,135,496 to 2,136,638
SMc04326
SMc04327: SMc04327 - hypothetical protein, at 2,136,677 to 2,137,315
SMc04327
Group
Condition
SMc04314
SMc04315
SMc04325
SMc04326
SMc04327
r2a control
R2A control for volatile experiments
-0.2
+0.0
+0.1
-0.1
-4.9
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
-0.3
+0.0
+0.1
-4.5
stress
6-Pentyl-2H-pyran-2-one 0.385649 mM
-0.3
-0.1
-0.2
+0.0
-3.0
stress
1-octen-3-ol 0.6030326667 mM
+0.1
-0.5
-0.3
+0.2
-2.9
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.0
-0.3
-0.1
+0.2
-3.0
stress
3-octanone 0.456 mM
+0.3
-0.5
-0.1
+0.1
-2.9
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.0
-0.2
-0.1
-0.1
-2.7
stress
1-octen-3-ol 0.6030326667 mM
+0.1
-0.2
-0.1
+0.1
-3.0
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.2
-0.1
-0.1
+0.0
-2.9
dmso control
DMSO control
+0.1
-0.0
-0.2
+0.1
-2.9
stress
3-octanone 2.655166667 mM
+0.1
+0.1
-0.1
+0.1
-3.0
lb no stress control
LB no stress control
-0.1
+0.2
-0.0
+0.2
-2.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
+0.1
+0.2
-0.1
-2.8
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
-0.2
-0.4
-0.3
+0.1
-1.5
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
+0.0
-0.4
+0.1
-0.2
-1.7
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.1
-0.1
-0.1
+0.0
-1.9
r2a-hepes control
R2A-HEPES control for volatile experiments
+0.0
-0.4
+0.1
-0.2
-1.7
r2a control
R2A control for volatile experiments
-0.0
-0.7
+0.1
-0.0
-1.4
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.0
-0.1
+0.2
+0.1
-2.2
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
+0.2
-0.4
-0.0
+0.2
-1.3
carbon source
Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
+0.1
+0.3
-0.0
+0.1
-1.6
lb no stress control
LB no stress control
-0.3
+0.2
-0.3
+0.4
-1.2
stress
3-octanone 0.456 mM
+0.2
+0.2
-0.1
+0.1
-1.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
+0.2
+0.4
-0.1
-1.3
nitrogen source
L-Glutamine (N)
+0.5
+0.2
+0.2
+0.2
-1.9
stress
Cisplatin 0.001 mg/ml
-0.2
+0.7
+0.3
-0.2
-0.9
stress
copper (II) chloride 1 mM
+0.4
+1.1
-0.4
+0.3
-0.9
carbon source
succinate (C)
-0.3
+0.1
-0.3
-0.3
+1.3
stress
Paraquat dichloride 0.3 mg/ml
-0.1
+0.8
+0.2
-0.4
+0.7
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.4
+0.4
-0.0
+0.0
+2.0
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