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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc04319 and SMc04320 are separated by 42 nucleotides
SMc04320 and SMc04321 are separated by 313 nucleotides
SMc04321 and SMc04322 are separated by 36 nucleotides
SMc04322 and SMc04323 are separated by 221 nucleotides
SMc04319: SMc04319 - hypothetical protein, at 2,222,299 to 2,222,586
SMc04319
SMc04320: SMc04320 - 30S ribosomal protein S21, at 2,222,629 to 2,222,865
SMc04320
SMc04321: SMc04321 - glutathione S-transferase, at 2,223,179 to 2,223,853
SMc04321
SMc04322: SMc04322 - oxidoreductase, at 2,223,890 to 2,224,939
SMc04322
SMc04323: SMc04323 - aminotransferase, at 2,225,161 to 2,226,387
SMc04323
Group
Condition
SMc04319
SMc04320
SMc04321
SMc04322
SMc04323
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.3
N.D.
-0.8
-0.5
+0.2
stress
Cisplatin 0.001 mg/ml
-1.2
N.D.
-0.6
-0.4
+0.1
nitrogen source
L-Arginine (N)
-1.3
N.D.
-0.4
-0.2
+0.3
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-1.4
N.D.
+0.2
-0.2
-0.0
carbon source
methyl-beta-D-xylopyranoside (C)
-0.8
N.D.
-0.3
+0.0
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
N.D.
-0.2
-0.6
+0.1
carbon source
D-Leucrose (C)
-0.4
N.D.
-0.4
-0.0
-0.3
carbon source
D-Trehalose (C)
-0.4
N.D.
-0.2
-0.2
-0.3
carbon source
Beta-Lactose (C)
-1.3
N.D.
+0.2
+0.1
-0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
-1.1
N.D.
+0.1
+0.2
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.7
N.D.
-0.6
+0.1
+0.2
nitrogen source
L-Leucine (N)
-0.2
N.D.
-0.0
+0.2
-0.9
r2a control
R2A control for volatile experiments
-1.0
N.D.
-0.1
+0.2
+0.1
carbon source
D-Tagatose (C)
-1.0
N.D.
+0.2
-0.2
+0.2
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.8
N.D.
+0.4
-0.1
-0.1
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.7
N.D.
+0.2
-0.2
+0.2
stress
Nickel (II) chloride 1 mM
-1.2
N.D.
+0.2
+0.3
+0.3
stress
A22 0.02 mg/ml
-0.9
N.D.
+0.1
+0.4
+0.1
nitrogen source
L-Asparagine (N)
-0.5
N.D.
-0.2
+0.3
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.7
N.D.
-0.6
+0.0
-0.0
lb
LB
-0.6
N.D.
+0.1
+0.4
+0.2
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.8
N.D.
-0.4
-0.0
-0.2
stress
Chlorite 0.1 mM
+0.6
N.D.
+0.2
-0.4
-0.1
carbon source
L-Lysine (C)
+0.8
N.D.
-0.3
-0.0
-0.0
nitrogen source
nitrate (N)
+0.6
N.D.
-0.1
+0.4
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+1.4
N.D.
-0.3
+0.1
+0.2
nitrogen source
Cytosine (N)
+0.4
N.D.
-0.1
+0.9
+0.2
stress
3-octanone 0.456 mM
+0.9
N.D.
+0.1
+0.2
+0.3
stress
Cisplatin 0.0005 mg/ml
+0.8
N.D.
+0.5
+0.0
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
+1.1
N.D.
+0.6
+0.1
+0.3
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