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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc04308 and SMc04309 are separated by 92 nucleotides
SMc04309 and SMc04310 are separated by 244 nucleotides
SMc04310 and SMc04311 are separated by 463 nucleotides
SMc04311 and SMc04439 are separated by 376 nucleotides
SMc04308: SMc04308 - oxidoreductase, at 2,126,366 to 2,127,181
SMc04308
SMc04309: SMc04309 - cobyric acid synthase, at 2,127,274 to 2,128,728
SMc04309
SMc04310: SMc04310 - hypothetical protein, at 2,128,973 to 2,129,116
SMc04310
SMc04311: SMc04311 - hypothetical protein, at 2,129,580 to 2,130,578
SMc04311
SMc04439: SMc04439 - glycine betaine transport ATP-binding ABC transporter protein, at 2,130,955 to 2,131,848
SMc04439
Group
Condition
SMc04308
SMc04309
SMc04310
SMc04311
SMc04439
carbon source
pipercolic (C)
+0.2
N.D.
N.D.
-0.8
-1.7
carbon source
pipercolic (C)
+0.1
N.D.
N.D.
-0.8
-1.7
carbon source
L-Proline (C)
-0.1
N.D.
N.D.
-0.5
-1.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.4
N.D.
N.D.
-0.3
-0.7
nutrient
L-Histidine
-0.2
N.D.
N.D.
-0.3
-0.7
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.2
N.D.
N.D.
-0.3
-0.6
carbon source
L-Leucine (C)
-0.0
N.D.
N.D.
-0.3
-0.7
nitrogen source
L-Histidine (N)
-0.3
N.D.
N.D.
-0.6
+0.2
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.4
N.D.
N.D.
-0.6
+0.3
lb
LB
-0.2
N.D.
N.D.
-0.8
+0.3
carbon source
D-Glucose (C)
+0.2
N.D.
N.D.
-0.4
-0.4
nitrogen source
L-Asparagine (N)
-0.3
N.D.
N.D.
-0.5
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
N.D.
N.D.
-0.7
+0.1
stress
Aluminum chloride
-0.6
N.D.
N.D.
-0.2
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
N.D.
N.D.
-0.8
+0.4
stress
Cobalt chloride 0.16 mM
+0.1
N.D.
N.D.
-0.7
+0.2
nitrogen source
nitrate (N)
-0.4
N.D.
N.D.
-0.6
+0.8
nitrogen source
Uridine (N)
+0.1
N.D.
N.D.
-0.6
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.0
N.D.
N.D.
-0.6
+0.4
stress
perchlorate 10 mM
+0.1
N.D.
N.D.
-0.5
+0.5
stress
copper (II) chloride 1 mM
-0.3
N.D.
N.D.
-0.2
+0.5
nitrogen source
L-Arginine (N)
+0.2
N.D.
N.D.
-0.6
+0.7
stress
1-octen-3-ol 0.6030326667 mM
-0.2
N.D.
N.D.
-0.2
+0.7
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
N.D.
N.D.
-0.4
+0.8
r2a control
R2A control
+0.2
N.D.
N.D.
-0.3
+0.7
stress
Chlorite 0.1 mM
-0.1
N.D.
N.D.
-0.2
+0.8
carbon source
acetate (C)
+0.4
N.D.
N.D.
-0.2
+0.6
stress
6-Pentyl-2H-pyran-2-one 0.4557668333 mM
+0.1
N.D.
N.D.
-0.1
+0.8
stress
nitrate 40 mM
+0.3
N.D.
N.D.
-0.3
+0.8
carbon source
L-Alanine (C)
+0.3
N.D.
N.D.
-0.0
+0.7
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