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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc04287 and SMc04289 are separated by 40 nucleotides
SMc04289 and SMc04291 are separated by 276 nucleotides
SMc04291 and SMc04292 are separated by 184 nucleotides
SMc04292 and SMc04296 are separated by 290 nucleotides
SMc04287: SMc04287 - hypothetical protein, at 2,208,385 to 2,209,086
SMc04287
SMc04289: SMc04289 - hypothetical protein, at 2,209,127 to 2,210,266
SMc04289
SMc04291: SMc04291 - L-sorbosone dehydrogenase (SNDH) protein, at 2,210,543 to 2,211,871
SMc04291
SMc04292: SMc04292 - adenylate/guanylate cyclase, at 2,212,056 to 2,213,825
SMc04292
SMc04296: SMc04296 - cell division protein FtsZ, at 2,214,116 to 2,215,156
SMc04296
Group
Condition
SMc04287
SMc04289
SMc04291
SMc04292
SMc04296
nitrogen source
Uridine (N)
-0.1
-0.2
-0.1
+0.0
-3.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.2
-0.3
-0.1
-0.2
-2.9
stress
nitrate 40 mM
-0.1
-0.0
-0.3
-0.3
-2.9
nitrogen source
L-Arginine (N)
-0.1
-0.3
-0.4
+0.1
-2.8
nitrogen source
Gelatin (N)
-0.1
+0.1
-0.5
-0.0
-3.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.2
-0.1
-0.6
-2.9
stress
Thallium(I) acetate 0.0025 mg/ml
+0.1
-0.0
-0.1
-0.2
-3.1
stress
copper (II) chloride 1 mM
-0.2
-0.1
-0.0
-0.0
-3.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
-0.2
+0.1
+0.0
-2.8
pH
LB, pH7
-0.0
-0.1
-0.0
+0.0
-3.2
stress
Cisplatin 0.0005 mg/ml
+0.0
-0.2
+0.0
-0.1
-3.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
+0.0
-0.1
-0.1
-2.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
-0.0
-0.0
+0.0
-2.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.1
-0.0
-0.1
+0.0
-2.9
stress
Cobalt chloride 0.16 mM
-0.4
+0.1
-0.2
+0.1
-2.6
stress
Thallium(I) acetate 0.001 mg/ml
+0.1
-0.3
-0.0
-0.2
-2.5
nitrogen source
L-Asparagine (N)
+0.3
+0.3
+0.1
-0.1
-3.4
carbon source
D-Leucrose (C)
-0.0
+0.0
-0.1
-0.2
-2.5
carbon source
D-Fructose (C)
+0.0
-0.0
+0.0
+0.1
-2.8
stress
Cisplatin 0.001 mg/ml
+0.0
+0.1
-0.0
+0.1
-2.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
+0.2
+0.2
+0.0
-2.8
nitrogen source
Gly-DL-Asp (N)
+0.1
-0.0
-0.1
+0.1
-2.6
nutrient
L-Lysine
+0.2
-0.1
+0.1
+0.1
-2.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.2
+0.0
+0.1
-0.0
-2.7
stress
Paraquat dichloride 0.2 mg/ml
-0.2
+0.1
+0.0
+0.1
-2.4
nitrogen source
NAG (N)
-0.1
+0.1
+0.0
+0.1
-2.6
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
+0.4
-0.4
-0.1
-2.7
stress
D-Cycloserine 0.05 mg/ml
+0.1
+0.0
-0.0
+0.1
-2.5
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.0
+0.1
+0.1
+0.1
-2.5
lb
LB
+0.1
-0.1
+0.0
+0.3
-2.4
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