Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc04218 and SMc04219 overlap by 4 nucleotidesSMc04219 and SMc04220 are separated by 120 nucleotidesSMc04220 and SMc04221 are separated by 205 nucleotidesSMc04221 and SMc04222 overlap by 8 nucleotides SMc04218: SMc04218 - transport transmembrane protein, at 2,045,245 to 2,046,006 SMc04218 SMc04219: SMc04219 - ABC transporter ATP-binding protein, at 2,046,003 to 2,046,929 SMc04219 SMc04220: SMc04220 - transcriptional regulator, at 2,047,050 to 2,047,367 SMc04220 SMc04221: SMc04221 - hypothetical protein, at 2,047,573 to 2,048,097 SMc04221 SMc04222: SMc04222 - hypothetical protein, at 2,048,090 to 2,048,380 SMc04222
Group Condition SMc04218 SMc04219 SMc04220 SMc04221 SMc04222
pH LB, pH6 +0.1 +0.0 -2.9 -0.7 N.D.
pH LB, pH6 -0.3 -0.1 -2.5 -0.3 N.D.
stress 6-Pentyl-2H-pyran-2-one 0.4557668333 mM -0.1 +0.1 -0.3 -1.8 N.D.
nitrogen source L-Arginine (N) -0.1 -1.3 -1.1 +0.5 N.D.
stress 3-octanone 5.310333333 mM -0.1 +0.2 -1.8 -0.2 N.D.
stress 3-octanone 2.655166667 mM -0.0 -0.0 -0.1 -1.6 N.D.
temperature LB, 23C -0.3 -0.6 -1.0 +0.2 N.D.
nitrogen source L-Asparagine (N) +0.0 -0.7 -0.7 -0.2 N.D.
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM -0.1 -0.2 +0.2 -1.5 N.D.
carbon source D-Ribose (C) +0.1 -0.3 -1.0 -0.3 N.D.
nitrogen source L-Histidine (N) +0.2 -0.6 -0.4 -0.5 N.D.
stress Chlorite 0.1 mM -0.6 -0.5 -0.6 +0.4 N.D.
nitrogen source L-Leucine (N) +0.2 -0.3 +0.3 -1.4 N.D.
stress Cisplatin 0.001 mg/ml -0.0 -0.6 -1.2 +0.7 N.D.
dmso control DMSO control +0.2 +0.4 -0.2 -1.5 N.D.
carbon source Myristic (C) +0.2 +0.3 -0.9 -0.4 N.D.
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +0.1 +0.3 -1.2 -0.1 N.D.
lb LB +0.1 -0.0 -1.2 +0.4 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 +0.3 +0.9 -1.4 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.9 +1.0 -0.2 N.D.
carbon source Sucrose (C) +0.0 -0.1 +0.8 -0.9 N.D.
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.1 +0.2 +0.7 -0.9 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.6 +1.3 -0.8 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.3 +2.0 -0.3 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.4 +1.2 +0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.1 +1.0 +0.5 N.D.
stress nitrate 40 mM -0.0 -0.2 +1.7 -0.0 N.D.
stress Paraquat dichloride 0.2 mg/ml +0.1 +0.1 +0.9 +0.8 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 +0.1 +1.4 +0.4 N.D.
stress Thallium(I) acetate 0.001 mg/ml +0.2 +0.0 +1.2 +0.7 N.D.
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