Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc04216 and SMc04217 overlap by 4 nucleotidesSMc04217 and SMc04218 are separated by 19 nucleotidesSMc04218 and SMc04219 overlap by 4 nucleotidesSMc04219 and SMc04220 are separated by 120 nucleotides SMc04216: SMc04216 - hypothetical protein, at 2,044,306 to 2,044,527 SMc04216 SMc04217: SMc04217 - transmembrane signal peptide protein, at 2,044,524 to 2,045,225 SMc04217 SMc04218: SMc04218 - transport transmembrane protein, at 2,045,245 to 2,046,006 SMc04218 SMc04219: SMc04219 - ABC transporter ATP-binding protein, at 2,046,003 to 2,046,929 SMc04219 SMc04220: SMc04220 - transcriptional regulator, at 2,047,050 to 2,047,367 SMc04220
Group Condition SMc04216 SMc04217 SMc04218 SMc04219 SMc04220
stress Chlorite 0.1 mM -0.7 -0.8 -0.6 -0.5 -0.6
temperature LB, 23C -0.9 -0.4 -0.3 -0.6 -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -0.5 -0.1 -0.9 -0.0
nitrogen source L-Arginine (N) +0.0 -0.1 -0.1 -1.3 -1.1
pH LB, pH6 +0.7 -0.3 -0.3 -0.1 -2.5
pH LB, pH6 +0.2 +0.3 +0.1 +0.0 -2.9
stress Cisplatin 0.001 mg/ml -0.5 +0.1 -0.0 -0.6 -1.2
stress Polymyxin B sulfate 0.00005 mg/ml -0.1 -0.9 -0.4 -0.5 -0.5
nitrogen source L-Asparagine (N) -0.2 -0.6 +0.0 -0.7 -0.7
stress Aluminum chloride -0.3 -0.6 -0.1 -0.3 -0.7
nitrogen source L-Histidine (N) -0.9 -0.3 +0.2 -0.6 -0.4
stress 3-octanone 5.310333333 mM +0.5 -0.0 -0.1 +0.2 -1.8
stress Nickel (II) chloride 1 mM -0.9 -0.4 -0.1 +0.4 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -0.2 -0.2 -0.9 +1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -0.5 -0.5 +0.3 +0.9
lb LB +0.4 -0.1 +0.2 -0.1 -1.1
carbon source Myristic (C) +0.1 -0.3 +0.2 +0.3 -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 +0.4 -0.1 -0.3 +0.3
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) +0.6 -0.2 +0.1 +0.3 -1.2
carbon source succinate (C) +0.7 -0.0 +0.0 +0.1 -1.0
carbon source D-Xylose (C) +0.1 +0.2 +0.1 +0.4 -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.2 +0.0 -0.4 +1.2
carbon source D-Trehalose (C) -0.6 +0.4 +0.1 +0.3 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.6 -0.3 -0.3 +2.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 +0.2 -0.0 +0.1 +1.4
nitrogen source Cytosine (N) -0.3 -0.1 +0.2 +0.0 +1.2
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM +0.5 +0.2 +0.2 -0.3 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.4 +0.1 -0.6 +1.3
stress nitrate 40 mM +0.1 +0.1 -0.0 -0.2 +1.7
stress copper (II) chloride 1 mM +0.5 +0.3 +0.1 -0.2 +1.0
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