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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc04210 and SMc04211 overlap by 8 nucleotides
SMc04211 and SMc04212 are separated by 281 nucleotides
SMc04212 and SMc04213 are separated by 28 nucleotides
SMc04213 and SMc04214 are separated by 204 nucleotides
SMc04210: SMc04210 - hypothetical protein, at 2,038,643 to 2,039,272
SMc04210
SMc04211: SMc04211 - hypothetical protein, at 2,039,265 to 2,039,852
SMc04211
SMc04212: SMc04212 - sensor histidine kinase transmembrane protein, at 2,040,134 to 2,041,669
SMc04212
SMc04213: SMc04213 - diacylglycerol kinase, at 2,041,698 to 2,042,111
SMc04213
SMc04214: SMc04214 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 2,042,316 to 2,043,332
SMc04214
Group
Condition
SMc04210
SMc04211
SMc04212
SMc04213
SMc04214
nitrogen source
L-Arginine (N)
-0.1
-1.7
+0.1
-4.6
N.D.
pH
LB, pH8
-0.4
+0.0
-1.6
-1.2
N.D.
nitrogen source
nitrate (N)
-0.9
-0.6
+0.0
-1.3
N.D.
nutrient
L-Lysine
+0.1
+0.1
-0.3
-1.9
N.D.
stress
Nickel (II) chloride 0.5 mM
-0.4
-0.0
-0.0
-1.6
N.D.
carbon source
D-Ribose (C)
+0.1
-0.5
-0.1
-1.3
N.D.
carbon source
Sucrose (C)
+0.0
+0.1
-0.3
-1.6
N.D.
nitrogen source
L-Histidine (N)
-0.5
+0.2
-0.6
-0.8
N.D.
nutrient
L-Histidine
+0.1
+0.4
-0.4
-1.8
N.D.
stress
nitrate 40 mM
-0.5
+0.2
-0.9
-0.4
N.D.
carbon source
succinate (C)
+0.1
+0.2
+0.1
-2.0
N.D.
pH
LB, pH8
-0.3
+0.2
-1.0
-0.6
N.D.
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.7
+0.1
-0.2
-2.1
N.D.
carbon source
palatinose (C)
+0.5
-0.3
-0.0
-1.5
N.D.
stress
3-octanone 0.456 mM
-0.1
+0.3
-0.4
-1.2
N.D.
stress
Chlorite 0.1 mM
-0.3
-1.0
-0.5
+0.5
N.D.
nutrient
Min media with glucose
+0.2
+0.3
-0.3
-1.2
N.D.
carbon source
palatinose (C)
+0.4
-0.1
-0.0
-1.4
N.D.
nutrient
L-Histidine
+0.5
+0.0
-0.3
-1.3
N.D.
stress
Cisplatin 0.0005 mg/ml
-0.9
-0.0
-0.6
+0.7
N.D.
stress
Paraquat dichloride 0.3 mg/ml
-0.8
+0.2
-0.7
+0.6
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.6
+0.1
-1.0
+0.8
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.2
+0.3
+0.4
-1.1
N.D.
stress
Thallium(I) acetate 0.0025 mg/ml
-0.7
+0.5
-0.5
+0.6
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
+0.5
-0.6
+0.8
N.D.
stress
Thallium(I) acetate 0.001 mg/ml
+0.1
-0.2
-0.7
+1.1
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
+0.0
-0.7
+1.0
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.4
+0.7
+0.3
-0.6
N.D.
nitrogen source
Cytosine (N)
-0.2
-0.4
+0.3
+1.4
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
+1.0
-0.4
+0.8
N.D.
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