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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc04163 and SMc04164 are separated by 549 nucleotides
SMc04164 and SMc04165 are separated by 123 nucleotides
SMc04165 and SMc04166 are separated by 235 nucleotides
SMc04166 and SMc04167 are separated by 13 nucleotides
SMc04163: SMc04163 - transcriptional regulator, at 2,152,254 to 2,153,150
SMc04163
SMc04164: SMc04164 - hypothetical protein, at 2,153,700 to 2,153,900
SMc04164
SMc04165: SMc04165 - oxidoreductase, at 2,154,024 to 2,154,887
SMc04165
SMc04166: SMc04166 - hypothetical protein, at 2,155,123 to 2,155,722
SMc04166
SMc04167: SMc04167 - histidine-rich transporter transmembrane protein, at 2,155,736 to 2,156,701
SMc04167
Group
Condition
SMc04163
SMc04164
SMc04165
SMc04166
SMc04167
carbon source
L-Fucose (C)
-0.4
N.D.
-0.6
-0.5
-0.3
stress
3-octanone 0.456 mM
-0.2
N.D.
-0.4
-0.7
+0.2
carbon source
pipercolic (C)
-0.6
N.D.
-0.0
-0.2
-0.2
stress
1-octen-3-ol 0.4933903333 mM
-0.5
N.D.
+0.0
-0.4
-0.2
carbon source
5-Aminovaleric (C)
-0.3
N.D.
-0.4
-0.2
-0.2
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.1
N.D.
-0.4
-0.5
-0.1
carbon source
pipercolic (C)
-0.6
N.D.
+0.1
+0.0
-0.3
stress
3-octanone 2.655166667 mM
-0.6
N.D.
-0.3
-0.1
+0.1
stress
Aluminum chloride
-0.1
N.D.
-0.5
+0.3
-0.3
dmso control
DMSO control
-0.4
N.D.
-0.4
+0.3
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
N.D.
-0.3
+0.3
+0.2
stress
Nickel (II) chloride 1 mM
-0.0
N.D.
-0.8
+0.2
+0.6
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.0
N.D.
-0.3
+0.7
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.4
N.D.
-0.0
+0.7
+0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.1
N.D.
-0.6
+0.7
+0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.2
N.D.
-0.4
+0.6
+0.4
stress
Thallium(I) acetate 0.0025 mg/ml
+0.3
N.D.
+0.3
+0.2
-0.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
N.D.
-0.2
+0.2
+0.7
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.2
N.D.
+0.5
+0.3
-0.2
stress
Paraquat dichloride 0.05 mg/ml
+0.4
N.D.
-0.2
+0.5
+0.1
stress
Chlorite 0.1 mM
-0.2
N.D.
+0.7
+0.4
-0.1
lb
LB
+0.2
N.D.
-0.1
+0.8
-0.0
stress
copper (II) chloride 1 mM
+0.6
N.D.
+0.3
+0.0
+0.1
nitrogen source
L-Histidine (N)
+0.2
N.D.
+0.3
+0.5
+0.0
stress
perchlorate 10 mM
+0.4
N.D.
+0.2
+0.6
-0.2
stress
Paraquat dichloride 0.2 mg/ml
+0.2
N.D.
-0.0
+0.7
+0.1
stress
D-Cycloserine 0.05 mg/ml
+0.3
N.D.
-0.0
+0.8
-0.0
pH
LB, pH6
+0.1
N.D.
+0.1
+0.9
+0.2
pH
LB, pH6
+0.2
N.D.
+0.0
+1.3
+0.2
stress
Cobalt chloride 0.16 mM
-0.1
N.D.
-0.1
+0.7
+1.6
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