Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc04148 and SMc04147 are separated by 234 nucleotidesSMc04147 and SMc04146 are separated by 111 nucleotidesSMc04146 and SMc04145 are separated by 147 nucleotidesSMc04145 and SMc04144 are separated by 63 nucleotides SMc04148: SMc04148 - aminomethyltransferase, at 119,188 to 121,557 SMc04148 SMc04147: SMc04147 - permease, at 121,792 to 123,576 SMc04147 SMc04146: SMc04146 - phosphoketolase, at 123,688 to 126,141 SMc04146 SMc04145: SMc04145 - hypothetical protein, at 126,289 to 127,074 SMc04145 SMc04144: SMc04144 - dihydroxy-acid dehydratase, at 127,138 to 128,862 SMc04144
Group Condition SMc04148 SMc04147 SMc04146 SMc04145 SMc04144
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.1 -0.1 -0.1 -0.7 -0.0
stress Aluminum chloride +0.0 -0.1 +0.1 -0.2 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 -0.2 +0.1 -0.4 -0.1
stress Fusidic 0.0001 mg/ml -0.1 -0.2 +0.1 -0.2 -0.4
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 -0.1 -0.2 +0.1 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.1 +0.3 +0.1 -0.5 -0.5
stress A22 0.02 mg/ml -0.1 -0.2 -0.0 +0.2 -0.4
temperature LB, 30C -0.1 -0.2 +0.1 +0.1 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.0 +0.2 -0.5 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.4 +0.5 -0.2 -0.2
stress nitrate 40 mM +0.2 -0.2 -0.1 -0.3 +0.3
stress Chlorite 0.1 mM +0.2 -0.1 +0.2 +0.1 -0.5
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 +0.0 +0.0 +0.3 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 -0.0 -0.1 -0.4 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.2 +0.1 -0.5 -0.0
stress Thallium(I) acetate 0.0025 mg/ml +0.0 +0.0 -0.0 -0.4 +0.3
stress Polymyxin B sulfate 0.00005 mg/ml +0.3 +0.4 +0.1 +0.1 -0.8
carbon source 5-Aminovaleric (C) -0.3 -0.1 -0.1 +0.2 +0.3
carbon source L-Lysine (C) -0.1 -0.2 -0.0 +0.3 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -0.1 -0.0 -0.2 +0.7
nitrogen source L-Serine (N) -0.1 +0.1 +0.0 +0.3 +0.3
carbon source acetate (C) +0.1 -0.1 +0.1 +0.3 +0.3
stress Nickel (II) chloride 1 mM -0.1 +0.5 -0.2 +0.2 +0.3
nitrogen source NAG (N) -0.0 +0.2 +0.2 +0.2 +0.3
nitrogen source nitrate (N) -0.1 +0.3 +0.1 +0.2 +0.4
nitrogen source L-Asparagine (N) -0.1 +0.2 +0.2 +0.4 +0.2
nitrogen source L-Histidine (N) +0.0 +0.2 +0.4 -0.0 +0.3
nitrogen source L-Arginine (N) +0.2 +0.1 +0.3 +0.4 +0.1
nitrogen source Uridine (N) +0.1 +0.1 +0.2 +0.5 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.3 +0.2 +0.0 +0.5
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