Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc04139 and SMc04138 are separated by 1 nucleotidesSMc04138 and SMc04137 are separated by 22 nucleotidesSMc04137 and SMc04136 overlap by 8 nucleotidesSMc04136 and SMc04135 are separated by 14 nucleotides SMc04139: SMc04139 - oxidoreductase, at 132,586 to 133,659 SMc04139 SMc04138: SMc04138 - oxidoreductase, at 133,661 to 134,677 SMc04138 SMc04137: SMc04137 - ABC transporter permease, at 134,700 to 135,587 SMc04137 SMc04136: SMc04136 - ABC transporter permease, at 135,580 to 136,527 SMc04136 SMc04135: SMc04135 - periplasmic binding ABC transporter protein, at 136,542 to 137,825 SMc04135
Group Condition SMc04139 SMc04138 SMc04137 SMc04136 SMc04135
carbon source D-Fructose (C) -0.6 +0.0 -0.2 -0.0 -0.2
stress Cisplatin 0.0005 mg/ml +0.2 -0.6 -0.3 +0.1 -0.3
stress Cisplatin 0.001 mg/ml -0.3 -0.3 +0.1 -0.3 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.8 -0.2 -0.4 -0.6
carbon source L-Alanine (C) -0.4 +0.2 -0.2 -0.0 -0.2
stress Nickel (II) chloride 0.5 mM -0.5 +0.2 -0.3 -0.0 -0.0
r2a control R2A control for volatile experiments +0.2 +0.2 -0.4 -0.1 -0.2
nitrogen source L-Arginine (N) +0.4 -0.0 +0.2 +0.3 -1.2
lb LB -0.2 +0.3 +0.1 -0.2 -0.2
nitrogen source D-Glucosamine Hydrochloride (N) -0.1 +0.6 -0.1 -0.3 -0.4
carbon source L-Leucine (C) -0.0 -0.5 +0.1 -0.1 +0.3
carbon source D-Ribose (C) -0.3 +0.5 -0.1 -0.1 -0.1
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 +0.5 -0.1 -0.1 -0.2
stress perchlorate 10 mM +0.5 -0.2 -0.1 +0.1 -0.4
carbon source D-Trehalose (C) -0.1 -0.4 +0.2 +0.0 +0.2
carbon source Protocatechuic Acid (C) -0.2 +0.5 +0.2 -0.1 -0.2
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 +0.5 +0.1 -0.2 -0.1
stress nitrate 40 mM +0.2 +0.5 -0.1 -0.2 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +0.6 -0.4 +0.0 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 -0.2 -0.1 +0.1 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +0.4 -0.2 +0.1 -0.6
nitrogen source L-Histidine (N) -0.2 +0.8 +0.2 +0.0 -0.4
stress 3-octanone 0.456 mM +0.3 +0.6 -0.2 -0.1 -0.1
nitrogen source L-Leucine (N) +0.4 -0.2 +0.3 -0.1 +0.2
nitrogen source L-Asparagine (N) -0.3 +0.6 +0.1 -0.1 +0.3
nutrient Min media with glucose -0.2 +0.9 -0.1 +0.1 +0.1
pH LB, pH6 +0.4 +0.5 +0.2 -0.1 -0.1
nitrogen source Gelatin (N) -0.1 +0.5 +0.3 -0.1 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.4 +0.1 +0.1 +0.2
stress Aluminum chloride -0.2 +0.8 +0.3 +0.1 +0.3
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