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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc03969 and SMc03970 are separated by 116 nucleotides
SMc03970 and SMc03971 are separated by 172 nucleotides
SMc03971 and SMc03972 overlap by 4 nucleotides
SMc03972 and SMc03973 are separated by 351 nucleotides
SMc03969: SMc03969 - hypothetical protein, at 2,962,635 to 2,963,381
SMc03969
SMc03970: SMc03970 - hypothetical protein, at 2,963,498 to 2,964,331
SMc03970
SMc03971: SMc03971 - multidrug-efflux system transmembrane protein, at 2,964,504 to 2,967,680
SMc03971
SMc03972: SMc03972 - multidrug efflux system transmembrane protein, at 2,967,677 to 2,968,834
SMc03972
SMc03973: SMc03973 - hypothetical protein, at 2,969,186 to 2,969,983
SMc03973
Group
Condition
SMc03969
SMc03970
SMc03971
SMc03972
SMc03973
stress
copper (II) chloride 1 mM
+0.3
+0.1
+0.1
+0.2
-3.4
stress
copper (II) chloride 1 mM
-0.3
+0.2
+0.0
+0.1
-2.1
stress
Fusidic 0.0001 mg/ml
+0.0
+0.1
-0.1
-0.2
-1.8
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
-0.6
+0.0
+0.4
-1.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-1.3
+0.6
-0.1
+0.2
-1.0
carbon source
Maltitol (C)
+0.9
+0.1
+0.0
-0.1
-2.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.9
+0.3
+0.1
+0.2
-0.8
carbon source
Maltitol (C)
+0.9
+0.1
+0.0
+0.0
-2.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.1
-0.2
+0.1
+0.5
-1.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.8
+0.5
+0.2
+0.3
-0.9
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.0
+0.2
+0.2
+0.7
-1.4
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.5
+0.2
-0.0
+0.2
-1.1
stress
Chlorite 0.1 mM
+0.6
+0.3
+0.2
-0.0
-0.9
carbon source
pipercolic (C)
-0.6
+0.3
+0.0
+0.2
+0.9
tsb
Day4 LB
-0.4
+0.4
+0.0
-0.1
+1.6
pH
LB, pH8
-0.4
+0.3
+0.2
+0.2
+1.2
r2a control
R2A control for volatile experiments
-0.2
+0.2
-0.0
+0.1
+1.5
r2a control
R2A control for volatile experiments
+0.5
-0.0
+0.0
-0.2
+1.4
pH
LB, pH6
+2.9
-0.0
+0.1
+0.1
-1.3
carbon source
Myristic (C)
+1.3
+0.2
+0.1
+0.1
+0.3
stress
Paraquat dichloride 0.3 mg/ml
+0.4
+0.6
+0.1
+0.2
+0.7
lb
LB
+0.5
-0.4
+0.3
-0.1
+1.7
r2a control
R2A control for volatile experiments
+0.3
+0.0
-0.0
+0.2
+1.6
stress
Paraquat dichloride 0.2 mg/ml
+0.6
-0.1
+0.1
+0.1
+1.6
lb
LB
+0.1
+0.0
+0.2
-0.0
+2.0
pH
LB, pH6
+3.2
+0.1
+0.2
+0.1
-1.3
stress
Paraquat dichloride 0.05 mg/ml
+0.5
-0.2
+0.2
+0.3
+1.8
stress
D-Cycloserine 0.05 mg/ml
+0.5
-0.3
+0.2
+0.2
+1.9
lb
LB
+0.4
+0.1
+0.1
+0.2
+1.7
stress
Nickel (II) chloride 1 mM
+1.1
+0.0
-0.0
-0.0
+1.7
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