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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc03929 and SMc03930 are separated by 195 nucleotides
SMc03930 and SMc03931 overlap by 8 nucleotides
SMc03931 and SMc03932 overlap by 4 nucleotides
SMc03932 and SMc03933 are separated by 114 nucleotides
SMc03929: SMc03929 - zinc-type alcohol dehydrogenase transmembrane protein, at 3,078,322 to 3,079,497
SMc03929
SMc03930: SMc03930 - sarcosine oxidase subunit gamma, at 3,079,693 to 3,080,247
SMc03930
SMc03931: SMc03931 - sarcosine oxidase subunit alpha, at 3,080,240 to 3,083,233
SMc03931
SMc03932: SMc03932 - sarcosine oxidase subunit delta, at 3,083,230 to 3,083,571
SMc03932
SMc03933: SMc03933 - sarcosine oxidase subunit B protein, at 3,083,686 to 3,084,939
SMc03933
Group
Condition
SMc03929
SMc03930
SMc03931
SMc03932
SMc03933
stress
3-octanone 2.655166667 mM
-0.1
-1.8
-0.1
+0.5
-0.1
nitrogen source
L-Asparagine (N)
-0.3
-0.6
+0.3
+0.9
+0.4
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.0
-0.9
+0.5
+0.6
+0.4
nutrient
L-Histidine
+0.0
+0.7
+0.5
+0.8
+0.5
nutrient
L-Lysine
-0.1
+0.7
+0.5
+0.9
+0.6
temperature
LB, 30C
+0.1
+0.8
+0.6
+0.7
+0.5
nutrient
Min media with glucose
-0.2
+1.4
+0.6
+0.6
+0.5
stress
Chloride 200 mM
-0.2
+0.8
+0.7
+0.7
+0.7
stress
Nickel (II) chloride 0.5 mM
-0.1
+0.6
+0.9
+0.7
+0.8
stress
copper (II) chloride 1 mM
-0.2
+0.9
+0.9
+0.7
+0.7
nutrient
L-Histidine
-0.1
+1.1
+0.6
+0.9
+0.5
pH
LB, pH6
-0.2
+1.1
+0.7
+0.8
+0.8
stress
nitrate 40 mM
-0.1
+1.2
+1.0
+0.4
+1.0
stress
copper (II) chloride 1 mM
-0.0
+0.9
+1.1
+0.6
+1.0
stress
Thallium(I) acetate 0.0025 mg/ml
-0.0
+1.3
+1.0
+0.6
+1.0
stress
Nickel (II) chloride 1 mM
+0.1
+0.2
+1.2
+1.1
+1.3
stress
Paraquat dichloride 0.3 mg/ml
-0.1
+0.8
+1.2
+1.1
+1.0
stress
Cisplatin 0.0005 mg/ml
-0.2
+1.2
+1.4
+0.5
+1.3
stress
Cisplatin 0.001 mg/ml
-0.1
+1.0
+1.4
+1.0
+1.3
stress
Thallium(I) acetate 0.001 mg/ml
+0.1
+1.2
+1.3
+0.9
+1.1
stress
Cobalt chloride 0.16 mM
+0.0
+1.1
+1.2
+1.2
+1.1
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.0
+1.7
+1.2
+0.8
+1.3
stress
Paraquat dichloride 0.2 mg/ml
+0.1
+2.0
+1.2
+1.3
+1.2
stress
Paraquat dichloride 0.05 mg/ml
-0.2
+1.7
+1.6
+1.6
+1.8
lb
LB
-0.1
+2.1
+1.7
+2.1
+1.8
lb
LB
-0.2
+2.1
+2.1
+1.8
+2.2
stress
Paraquat dichloride 0.2 mg/ml
+0.1
+2.4
+1.9
+1.7
+2.0
lb
LB
+0.0
+2.0
+2.3
+2.0
+2.2
stress
perchlorate 10 mM
-0.1
+2.1
+2.6
+2.2
+2.8
stress
D-Cycloserine 0.05 mg/ml
-0.0
+2.6
+2.2
+2.3
+2.5
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