Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc03886 and SMc03887 are separated by 451 nucleotidesSMc03887 and SMc03888 are separated by 9 nucleotidesSMc03888 and SMc03889 are separated by 169 nucleotidesSMc03889 and SMc03890 are separated by 118 nucleotides SMc03886: SMc03886 - transposase, at 3,552,832 to 3,553,908 SMc03886 SMc03887: SMc03887 - amino acid efflux protein, at 3,554,360 to 3,555,007 SMc03887 SMc03888: SMc03888 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, at 3,555,017 to 3,556,270 SMc03888 SMc03889: SMc03889 - transporter, at 3,556,440 to 3,557,579 SMc03889 SMc03890: SMc03890 - transcriptional regulator, at 3,557,698 to 3,558,480 SMc03890
Group Condition SMc03886 SMc03887 SMc03888 SMc03889 SMc03890
carbon source NAG (C) N.D. -2.0 N.D. -0.6 +0.0
stress 3-octanone 0.456 mM N.D. -0.2 N.D. +0.2 -2.1
pH LB, pH8 N.D. -0.1 N.D. -1.3 -0.4
carbon source D-Sorbitol (C) N.D. -0.3 N.D. -0.8 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.4 N.D. -1.9 -0.1
nitrogen source L-Asparagine (N) N.D. -0.8 N.D. -0.4 -0.2
r2a control R2A control for volatile experiments N.D. +0.0 N.D. -0.3 -1.2
nitrogen source Cytosine (N) N.D. -0.0 N.D. -0.7 -0.6
stress Aluminum chloride N.D. -0.9 N.D. -0.8 +0.3
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) N.D. -0.4 N.D. -0.4 -0.4
stress Chlorite 0.1 mM N.D. -0.1 N.D. -1.6 +0.7
lb no stress control LB no stress control N.D. -0.0 N.D. +0.1 -1.0
lb LB N.D. -0.2 N.D. -1.2 +0.5
stress 6-Pentyl-2H-pyran-2-one 0.385649 mM N.D. +0.4 N.D. +0.0 -1.3
carbon source D-Ribose (C) N.D. -0.3 N.D. +0.4 -0.8
carbon source D-Trehalose (C) N.D. -0.1 N.D. -0.8 +0.4
stress 6-Pentyl-2H-pyran-2-one 0.4177863333 mM N.D. +0.1 N.D. +0.3 -0.9
carbon source D-Mannose (C) N.D. -0.0 N.D. +0.7 -1.2
lb LB N.D. -0.3 N.D. -0.5 +0.4
stress Nickel (II) chloride 1 mM N.D. -0.4 N.D. -0.6 +0.7
stress 3-octanone 0.456 mM N.D. +0.0 N.D. +0.5 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.0 N.D. +1.0 -1.2
stress Cisplatin 0.0005 mg/ml N.D. -0.7 N.D. +0.3 +0.1
stress copper (II) chloride 1 mM N.D. -0.8 N.D. +0.6 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.2 N.D. -1.1 +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.4 N.D. -0.5 +0.2
stress perchlorate 10 mM N.D. -0.1 N.D. -0.4 +0.7
carbon source D-Ribose (C) N.D. +0.1 N.D. +0.9 -0.3
nitrogen source L-Histidine (N) N.D. +0.4 N.D. +0.4 +0.4
nitrogen source L-Leucine (N) N.D. +0.1 N.D. +0.4 +1.0
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