Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc03866 and SMc03867 are separated by 4 nucleotidesSMc03867 and SMc03868 are separated by 77 nucleotidesSMc03868 and SMc03869 are separated by 268 nucleotidesSMc03869 and SMc03870 are separated by 31 nucleotides SMc03866: SMc03866 - ABC transporter ATP-binding protein, at 3,529,672 to 3,531,513 SMc03866 SMc03867: SMc03867 - hypothetical protein, at 3,531,518 to 3,532,168 SMc03867 SMc03868: SMc03868 - hypothetical protein, at 3,532,246 to 3,532,758 SMc03868 SMc03869: SMc03869 - thiamine transporter substrate binding subunit, at 3,533,027 to 3,534,055 SMc03869 SMc03870: SMc03870 - thiamine transporter membrane protein, at 3,534,087 to 3,535,694 SMc03870
Group Condition SMc03866 SMc03867 SMc03868 SMc03869 SMc03870
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 N.D. -0.5 -0.5 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 N.D. -0.5 -0.5 -0.3
stress Nickel (II) chloride 1 mM -0.7 N.D. -0.4 -0.3 -0.3
lb LB -0.3 N.D. -0.8 -0.2 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 N.D. -1.1 -0.1 -0.4
pH LB, pH8 -0.3 N.D. -0.6 -0.3 -0.2
stress Thallium(I) acetate 0.0025 mg/ml +0.0 N.D. -0.4 -0.4 -0.7
stress Fusidic 0.0001 mg/ml -0.5 N.D. -0.3 -0.2 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 N.D. -0.6 -0.2 -0.2
stress A22 0.02 mg/ml -0.1 N.D. -0.6 -0.1 -0.4
temperature LB, 23C -0.4 N.D. -0.3 -0.1 -0.3
lb LB +0.0 N.D. -0.4 -0.3 -0.5
nutrient L-Histidine -0.3 N.D. -0.3 -0.1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 N.D. -0.1 -0.2 -0.3
stress D-Cycloserine 0.05 mg/ml -0.3 N.D. -0.3 -0.2 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 N.D. -0.4 -0.1 -0.1
pH LB, pH6 -0.2 N.D. -0.5 -0.1 -0.3
pH LB, pH7 -0.4 N.D. -0.3 +0.0 -0.3
stress perchlorate 10 mM -0.3 N.D. -0.2 -0.2 -0.3
temperature LB, 30C -0.2 N.D. -0.4 -0.2 -0.2
stress Polymyxin B sulfate 0.00005 mg/ml -0.4 N.D. -0.5 +0.1 -0.2
carbon source D-Glucosamine Hydrochloride (C) +0.2 N.D. -0.9 +0.3 -0.2
carbon source acetate (C) -0.2 N.D. +0.3 -0.3 -0.3
nitrogen source nitrate (N) -0.3 N.D. -0.2 +0.4 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 N.D. -0.2 +0.1 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 N.D. +0.6 +0.2 -0.1
nitrogen source L-Asparagine (N) +0.4 N.D. +0.4 -0.2 -0.2
nitrogen source L-Serine (N) +0.3 N.D. +0.7 +0.1 -0.2
nitrogen source L-Glutamine (N) +0.3 N.D. +0.7 -0.2 +0.1
r2a control R2A control for volatile experiments -0.0 N.D. +0.8 +0.2 +0.3
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