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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc03853 and SMc03854 are separated by 97 nucleotides
SMc03854 and SMc03855 are separated by 14 nucleotides
SMc03855 and SMc03856 overlap by 4 nucleotides
SMc03856 and SMc03857 are separated by 384 nucleotides
SMc03853: SMc03853 - intracellular septation protein A, at 3,517,499 to 3,518,131
SMc03853
SMc03854: SMc03854 - cell division protein, at 3,518,229 to 3,519,875
SMc03854
SMc03855: SMc03855 - hypothetical protein, at 3,519,890 to 3,521,164
SMc03855
SMc03856: SMc03856 - diaminopimelate epimerase, at 3,521,161 to 3,522,081
SMc03856
SMc03857: SMc03857 - signal recognition particle protein, at 3,522,466 to 3,524,007
SMc03857
Group
Condition
SMc03853
SMc03854
SMc03855
SMc03856
SMc03857
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
+1.4
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
+1.5
N.D.
N.D.
stress
Aluminum chloride
N.D.
N.D.
+1.5
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
+1.5
N.D.
N.D.
stress
Chlorite 0.1 mM
N.D.
N.D.
+1.6
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
N.D.
+1.6
N.D.
N.D.
stress
copper (II) chloride 1 mM
N.D.
N.D.
+1.6
N.D.
N.D.
stress
Paraquat dichloride 0.3 mg/ml
N.D.
N.D.
+1.8
N.D.
N.D.
pH
LB, pH6
N.D.
N.D.
+1.8
N.D.
N.D.
stress
Nickel (II) chloride 0.5 mM
N.D.
N.D.
+1.8
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
N.D.
+1.8
N.D.
N.D.
stress
Thallium(I) acetate 0.0025 mg/ml
N.D.
N.D.
+1.8
N.D.
N.D.
stress
Paraquat dichloride 0.2 mg/ml
N.D.
N.D.
+1.9
N.D.
N.D.
stress
Cisplatin 0.0005 mg/ml
N.D.
N.D.
+2.0
N.D.
N.D.
stress
copper (II) chloride 1 mM
N.D.
N.D.
+2.0
N.D.
N.D.
stress
Fusidic 0.0001 mg/ml
N.D.
N.D.
+2.1
N.D.
N.D.
stress
Polymyxin B sulfate 0.00005 mg/ml
N.D.
N.D.
+2.1
N.D.
N.D.
pH
LB, pH6
N.D.
N.D.
+2.2
N.D.
N.D.
stress
nitrate 40 mM
N.D.
N.D.
+2.4
N.D.
N.D.
stress
Cisplatin 0.001 mg/ml
N.D.
N.D.
+2.4
N.D.
N.D.
stress
Cobalt chloride 0.16 mM
N.D.
N.D.
+2.6
N.D.
N.D.
pH
LB, pH8
N.D.
N.D.
+3.0
N.D.
N.D.
pH
LB, pH8
N.D.
N.D.
+3.2
N.D.
N.D.
stress
D-Cycloserine 0.05 mg/ml
N.D.
N.D.
+3.6
N.D.
N.D.
stress
Paraquat dichloride 0.05 mg/ml
N.D.
N.D.
+3.6
N.D.
N.D.
lb
LB
N.D.
N.D.
+3.9
N.D.
N.D.
lb
LB
N.D.
N.D.
+4.2
N.D.
N.D.
lb
LB
N.D.
N.D.
+4.3
N.D.
N.D.
stress
perchlorate 10 mM
N.D.
N.D.
+5.8
N.D.
N.D.
stress
Paraquat dichloride 0.2 mg/ml
N.D.
N.D.
+6.2
N.D.
N.D.
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