Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc03838 and SMc03839 are separated by 246 nucleotidesSMc03839 and SMc03840 are separated by 125 nucleotidesSMc03840 and SMc03841 are separated by 17 nucleotidesSMc03841 and SMc03842 are separated by 44 nucleotides SMc03838: SMc03838 - hypothetical protein, at 3,503,288 to 3,505,879 SMc03838 SMc03839: SMc03839 - hypothetical protein, at 3,506,126 to 3,506,863 SMc03839 SMc03840: SMc03840 - acetyltransferase (antibiotic resistance) protein, at 3,506,989 to 3,507,546 SMc03840 SMc03841: SMc03841 - ATP-dependent Clp protease proteolytic subunit, at 3,507,564 to 3,508,181 SMc03841 SMc03842: SMc03842 - hypothetical protein, at 3,508,226 to 3,508,585 SMc03842
Group Condition SMc03838 SMc03839 SMc03840 SMc03841 SMc03842
nitrogen source L-Arginine (N) -0.6 -4.3 -0.3 -0.2 -1.6
pH LB, pH8 -0.0 -4.5 -0.1 -0.2 +0.1
pH LB, pH8 -0.1 -4.5 +0.0 -0.1 +0.2
r2a-hepes control R2A-HEPES control for volatile experiments -0.2 -3.2 +0.1 -0.0 -0.2
r2a-hepes control R2A-HEPES control for volatile experiments +0.0 -3.0 -0.2 -0.2 -0.1
r2a control R2A control for volatile experiments -0.3 -2.5 +0.3 -0.0 -0.7
stress copper (II) chloride 1 mM -0.4 -3.2 +0.3 -0.0 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -2.4 -0.1 -0.3 +0.2
lb LB -0.1 -2.9 +0.0 -0.1 +0.3
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.1 -2.8 +0.0 -0.0 +0.3
stress Sisomicin 0.004 mg/ml +0.0 -2.1 -0.1 +0.3 -0.5
stress Polymyxin B sulfate 0.00005 mg/ml -0.4 -3.1 +0.2 +0.3 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -1.5 +0.3 -0.1 -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -1.5 -0.5 -0.4 +0.5
nitrogen source nitrate (N) -0.3 -1.1 -0.3 -0.0 -0.3
r2a-hepes control R2A-HEPES control for volatile experiments -0.2 -1.6 +0.4 -0.0 -0.3
r2a-hepes control R2A-HEPES control for volatile experiments +0.1 -1.4 +0.1 -0.1 -0.3
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 -1.5 -0.1 -0.0 +0.4
carbon source D-Xylose (C) +0.1 -1.4 -0.1 -0.0 +0.3
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.2 -1.2 +0.2 -0.1 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -1.7 +0.7 -0.0 +0.2
carbon source methyl-beta-D-xylopyranoside (C) -0.1 -1.4 +0.1 +0.0 +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.1 -0.1 +0.0 +1.0
stress D-Cycloserine 0.05 mg/ml -0.1 +1.0 -0.2 -0.3 -0.7
nutrient L-Lysine +0.1 +0.9 -0.2 -0.0 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.0 +1.2 -0.4 -0.2 +0.4
stress nitrate 40 mM -0.3 +0.6 +0.0 -0.1 +0.9
nutrient L-Histidine +0.1 +1.3 -0.4 +0.2 +0.1
carbon source Lactitol (C) +0.1 +1.7 +0.1 -0.1 -0.3
stress copper (II) chloride 1 mM -0.2 +1.1 +0.5 -0.1 +0.5
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