Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc03837 and SMc03838 overlap by 4 nucleotidesSMc03838 and SMc03839 are separated by 246 nucleotidesSMc03839 and SMc03840 are separated by 125 nucleotidesSMc03840 and SMc03841 are separated by 17 nucleotides SMc03837: SMc03837 - ABC transporter ATP-binding protein, at 3,502,572 to 3,503,291 SMc03837 SMc03838: SMc03838 - hypothetical protein, at 3,503,288 to 3,505,879 SMc03838 SMc03839: SMc03839 - hypothetical protein, at 3,506,126 to 3,506,863 SMc03839 SMc03840: SMc03840 - acetyltransferase (antibiotic resistance) protein, at 3,506,989 to 3,507,546 SMc03840 SMc03841: SMc03841 - ATP-dependent Clp protease proteolytic subunit, at 3,507,564 to 3,508,181 SMc03841
Group Condition SMc03837 SMc03838 SMc03839 SMc03840 SMc03841
nitrogen source L-Arginine (N) -0.8 -0.6 -4.3 -0.3 -0.2
pH LB, pH8 +0.2 -0.0 -4.5 -0.1 -0.2
pH LB, pH8 +0.2 -0.1 -4.5 +0.0 -0.1
stress copper (II) chloride 1 mM -0.8 -0.4 -3.2 +0.3 -0.0
r2a-hepes control R2A-HEPES control for volatile experiments -0.3 +0.0 -3.0 -0.2 -0.2
stress Polymyxin B sulfate 0.00005 mg/ml -0.7 -0.4 -3.1 +0.2 +0.3
r2a-hepes control R2A-HEPES control for volatile experiments -0.2 -0.2 -3.2 +0.1 -0.0
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.0 -0.1 -2.8 +0.0 -0.0
lb LB +0.2 -0.1 -2.9 +0.0 -0.1
r2a control R2A control for volatile experiments -0.0 -0.3 -2.5 +0.3 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 -0.3 -2.4 -0.1 -0.3
nitrogen source nitrate (N) -0.5 -0.3 -1.1 -0.3 -0.0
stress Sisomicin 0.004 mg/ml -0.2 +0.0 -2.1 -0.1 +0.3
r2a-hepes control R2A-HEPES control for volatile experiments -0.4 -0.1 -1.3 +0.1 -0.2
r2a control R2A control for volatile experiments -0.7 -0.2 -0.9 -0.0 +0.2
r2a-hepes control R2A-HEPES control for volatile experiments -0.4 +0.1 -1.4 +0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.1 -0.2 -1.5 -0.5 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -0.2 -1.7 +0.7 -0.0
stress sodium fluoride 100 mM +0.4 -0.1 -1.5 -0.0 -0.2
stress nitrate 40 mM -1.5 -0.3 +0.6 +0.0 -0.1
r2a-hepes control R2A-HEPES control for volatile experiments +0.2 -0.2 -1.6 +0.4 -0.0
carbon source D-Xylose (C) +0.4 +0.1 -1.4 -0.1 -0.0
nitrogen source Gly-DL-Asp (N) +0.6 +0.1 -1.2 -0.2 -0.1
nitrogen source L-Leucine (N) -1.2 +0.3 +0.4 +0.1 -0.1
carbon source D-Glucose (C) +0.8 +0.3 -0.9 +0.0 -0.2
stress Chlorite 0.1 mM -0.8 -0.2 +0.7 +0.2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -0.0 +1.2 -0.4 -0.2
nutrient L-Histidine -0.3 +0.1 +1.3 -0.4 +0.2
lb LB +0.8 +0.0 +1.1 -0.1 -0.1
carbon source Lactitol (C) +0.5 +0.1 +1.7 +0.1 -0.1
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