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Cofit
Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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500 nt
SMc03824 and SMc03825 overlap by 4 nucleotides
SMc03825 and SMc03826 are separated by 62 nucleotides
SMc03826 and SMc03827 are separated by 212 nucleotides
SMc03827 and SMc03828 are separated by 133 nucleotides
SMc03824: SMc03824 - transcriptional regulator, at 3,490,678 to 3,491,157
SMc03824
SMc03825: SMc03825 - transporter, at 3,491,154 to 3,492,392
SMc03825
SMc03826: SMc03826 - argininosuccinate synthase, at 3,492,455 to 3,493,672
SMc03826
SMc03827: SMc03827 - amino acid efflux transmembrane protein, at 3,493,885 to 3,494,526
SMc03827
SMc03828: SMc03828 - ABC transporter ATP-binding protein, at 3,494,660 to 3,495,454
SMc03828
Group
Condition
SMc03824
SMc03825
SMc03826
SMc03827
SMc03828
carbon source
L-Glutamine (C)
-0.2
-0.1
-6.4
-0.0
N.D.
carbon source
Beta-Lactose (C)
-0.6
-0.1
-6.2
+0.3
N.D.
carbon source
Glycerol (C)
-0.1
-0.0
-6.3
-0.1
N.D.
carbon source
L-Fucose (C)
+0.1
-0.1
-5.8
-0.6
N.D.
carbon source
NAG (C)
-0.2
+0.0
-6.1
-0.1
N.D.
carbon source
L-Histidine (C)
-0.4
-0.0
-6.4
+0.4
N.D.
carbon source
D-Ribose (C)
-0.3
-0.2
-6.1
+0.3
N.D.
carbon source
L-Proline (C)
-0.0
-0.1
-6.3
+0.1
N.D.
nitrogen source
L-Histidine (N)
-0.7
-0.2
-4.4
-0.9
N.D.
carbon source
L-Malic (C)
-0.4
-0.0
-6.2
+0.4
N.D.
carbon source
Uridine (C)
-0.1
+0.1
-6.3
+0.1
N.D.
carbon source
D-Glucose (C)
-0.4
-0.1
-5.9
+0.2
N.D.
carbon source
D-Arabinose (C)
-0.3
-0.1
-6.2
+0.4
N.D.
carbon source
L-Leucine (C)
-0.1
+0.1
-6.4
+0.3
N.D.
carbon source
D-Cellobiose (C)
-0.2
-0.0
-6.3
+0.6
N.D.
carbon source
succinate (C)
-0.2
-0.0
-6.2
+0.6
N.D.
carbon source
D-Salicin (C)
-0.1
-0.1
-6.1
+0.4
N.D.
carbon source
D-Mannose (C)
-0.1
+0.0
-6.2
+0.4
N.D.
carbon source
pyruvate (C)
-0.1
-0.0
-6.3
+0.6
N.D.
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.4
-0.0
-5.9
-0.0
N.D.
carbon source
D-Maltose (C)
-0.1
-0.0
-6.2
+0.9
N.D.
nitrogen source
L-Asparagine (N)
+0.4
-0.1
-5.3
-0.4
N.D.
carbon source
L-Lactate (C)
-0.1
-0.0
-5.6
+0.4
N.D.
carbon source
D-Sorbitol (C)
+0.1
-0.1
-5.7
+0.4
N.D.
carbon source
L-Arabinose (C)
+0.2
+0.0
-6.1
+0.8
N.D.
nitrogen source
NAG (N)
+0.5
+0.1
-5.1
-0.3
N.D.
carbon source
D,L-Lactate (C)
-0.3
+0.1
-5.1
+0.7
N.D.
lb
LB
+0.1
+0.0
+6.0
-0.5
N.D.
stress
D-Cycloserine 0.05 mg/ml
+0.6
-0.1
+6.2
-1.1
N.D.
stress
perchlorate 10 mM
+0.1
-0.1
+6.3
-0.4
N.D.
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