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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc03816 and SMc03817 are separated by 15 nucleotides
SMc03817 and SMc03818 are separated by 189 nucleotides
SMc03818 and SMc03819 are separated by 13 nucleotides
SMc03819 and SMc03820 are separated by 32 nucleotides
SMc03816: SMc03816 - transcriptional regulator, at 3,483,136 to 3,484,338
SMc03816
SMc03817: SMc03817 - sugar kinase, at 3,484,354 to 3,485,256
SMc03817
SMc03818: SMc03818 - exodeoxyribonuclease III protein, at 3,485,446 to 3,486,252
SMc03818
SMc03819: SMc03819 - hypothetical protein, at 3,486,266 to 3,486,721
SMc03819
SMc03820: SMc03820 - transcriptional regulator, at 3,486,754 to 3,487,437
SMc03820
Group
Condition
SMc03816
SMc03817
SMc03818
SMc03819
SMc03820
carbon source
L-Histidine (C)
-1.0
-0.0
-0.3
N.D.
N.D.
carbon source
L-Proline (C)
-0.9
-0.1
-0.3
N.D.
N.D.
carbon source
L-Glutamine (C)
-0.7
-0.1
-0.4
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.0
+0.1
-0.3
N.D.
N.D.
nutrient
Min media with glucose
-0.4
-0.3
-0.4
N.D.
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.5
-0.3
-0.1
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-1.0
+0.2
-0.1
N.D.
N.D.
carbon source
D-Arabinose (C)
-0.5
-0.1
-0.3
N.D.
N.D.
r2a control
R2A control for volatile experiments
-0.3
-0.3
-0.2
N.D.
N.D.
nitrogen source
Gly-DL-Asp (N)
-0.7
-0.0
-0.1
N.D.
N.D.
nitrogen source
L-Glutamine (N)
-0.7
-0.0
-0.1
N.D.
N.D.
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-0.2
-0.3
-0.3
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.5
+0.2
-0.5
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
-0.1
-0.2
N.D.
N.D.
r2a-hepes control
R2A-HEPES control for volatile experiments
-0.5
-0.2
-0.1
N.D.
N.D.
carbon source
pipercolic (C)
-0.7
+0.1
-0.1
N.D.
N.D.
carbon source
L-Alanine (C)
-0.8
+0.1
-0.0
N.D.
N.D.
carbon source
Myristic (C)
-0.6
-0.1
+0.1
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.4
+0.1
-0.2
N.D.
N.D.
carbon source
L-Alanine (C)
-0.8
+0.1
+0.2
N.D.
N.D.
nitrogen source
L-Histidine (N)
-0.4
-0.3
+0.2
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.3
+0.2
-0.4
N.D.
N.D.
carbon source
L-Lysine (C)
-0.7
+0.2
+0.2
N.D.
N.D.
carbon source
D-Mannose (C)
-0.4
+0.2
+0.1
N.D.
N.D.
carbon source
5-Aminovaleric (C)
-0.3
-0.1
+0.5
N.D.
N.D.
carbon source
Methyl beta-D-glucopyranoside (C)
+0.6
-0.2
-0.1
N.D.
N.D.
stress
perchlorate 10 mM
+0.6
-0.3
+0.1
N.D.
N.D.
carbon source
Methyl beta-D-glucopyranoside (C)
+0.7
-0.1
+0.2
N.D.
N.D.
stress
copper (II) chloride 1 mM
-0.0
+0.2
+0.7
N.D.
N.D.
nitrogen source
Cytosine (N)
+0.3
+0.2
+0.4
N.D.
N.D.
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