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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
SMc03811 and SMc03812 overlap by 1 nucleotides
SMc03812 and SMc03813 are separated by 492 nucleotides
SMc03813 and SMc03814 are separated by 38 nucleotides
SMc03814 and SMc03815 are separated by 17 nucleotides
SMc03811: SMc03811 - hypothetical protein, at 3,477,752 to 3,478,582
SMc03811
SMc03812: SMc03812 - oxidoreductase, at 3,478,582 to 3,479,658
SMc03812
SMc03813: SMc03813 - periplasmic binding ABC transporter protein, at 3,480,151 to 3,481,164
SMc03813
SMc03814: SMc03814 - ABC transporter permease, at 3,481,203 to 3,482,210
SMc03814
SMc03815: SMc03815 - ABC transporter ATP-binding protein, at 3,482,228 to 3,483,007
SMc03815
Group
Condition
SMc03811
SMc03812
SMc03813
SMc03814
SMc03815
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.5
-0.2
+0.1
-0.2
-0.4
nitrogen source
L-Leucine (N)
-0.2
-0.0
-0.0
-0.3
-0.3
stress
3-octanone 0.456 mM
-0.5
-0.2
+0.0
-0.1
-0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.4
-0.3
-0.3
-0.1
-0.4
stress
Paraquat dichloride 0.3 mg/ml
+0.3
-0.3
-0.3
-0.1
-0.3
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
-0.4
+0.0
+0.2
-0.1
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.6
-0.3
+0.4
+0.3
-0.3
nitrogen source
Gelatin (N)
+0.4
-0.3
+0.1
-0.1
-0.5
stress
Nickel (II) chloride 1 mM
-0.1
-0.1
-0.3
+0.2
-0.2
nitrogen source
L-Arginine (N)
+0.0
-0.3
+0.3
+0.2
-0.6
nitrogen source
L-Serine (N)
+0.4
-0.1
-0.0
-0.4
-0.2
nitrogen source
Uridine (N)
+0.4
-0.4
-0.0
-0.3
-0.1
nitrogen source
NAG (N)
+0.3
-0.1
+0.0
-0.2
-0.4
nitrogen source
L-Asparagine (N)
+0.4
-0.2
-0.1
-0.1
-0.3
stress
Sisomicin 0.004 mg/ml
+0.2
+0.1
+0.0
-0.1
-0.5
stress
copper (II) chloride 1 mM
+0.2
+0.3
-0.1
-0.5
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
+0.2
-0.0
-0.1
-0.6
stress
3-octanone 0.456 mM
-0.1
+0.1
-0.1
-0.2
+0.3
nutrient
L-Lysine
-0.4
+0.2
+0.1
-0.0
+0.1
nitrogen source
L-Histidine (N)
+0.4
-0.2
+0.1
-0.1
-0.1
carbon source
D-Glucose (C)
-0.0
+0.2
-0.2
+0.3
-0.1
nitrogen source
Gly-DL-Asp (N)
+0.4
-0.3
-0.1
-0.1
+0.2
stress
Aluminum chloride
+0.2
-0.1
-0.2
-0.1
+0.4
carbon source
Myristic (C)
+0.3
+0.1
+0.0
+0.1
-0.4
carbon source
5-Aminovaleric (C)
+0.3
-0.2
+0.1
+0.1
-0.2
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.4
+0.2
+0.1
+0.2
+0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.0
-0.3
+0.4
+0.1
+0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.4
+0.1
-0.2
-0.0
-0.1
lb
LB
+0.5
-0.0
+0.0
-0.1
+0.2
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.3
+0.1
+0.2
-0.3
+0.5
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