Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc03205 and SMc03206 are separated by 163 nucleotidesSMc03206 and SMc03207 are separated by 11 nucleotidesSMc03207 and SMc03208 are separated by 80 nucleotidesSMc03208 and SMc03209 are separated by 79 nucleotides SMc03205: SMc03205 - formyltetrahydrofolate deformylase, at 3,170,213 to 3,171,097 SMc03205 SMc03206: SMc03206 - maleylacetoacetate isomerase (glutathione transferase zeta 1) protein, at 3,171,261 to 3,171,914 SMc03206 SMc03207: SMc03207 - aromatic amino acid degradation protein, at 3,171,926 to 3,172,942 SMc03207 SMc03208: SMc03208 - homogentisate 1,2-dioxygenase, at 3,173,023 to 3,174,384 SMc03208 SMc03209: SMc03209 - transcriptional regulator, at 3,174,464 to 3,174,910 SMc03209
Group Condition SMc03205 SMc03206 SMc03207 SMc03208 SMc03209
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. -0.2 -0.8 -0.5 -0.2
pH LB, pH6 N.D. -0.4 -0.4 -0.2 -0.2
carbon source Myristic (C) N.D. -0.2 -0.6 -0.1 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.5 -0.2 -0.1 -0.1
nitrogen source L-Asparagine (N) N.D. -0.3 -0.5 -0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.0 -0.8 -0.0 -0.0
lb LB N.D. -0.3 -0.4 -0.0 -0.1
carbon source D-Trehalose (C) N.D. -0.2 -0.2 -0.4 +0.2
stress 6-Pentyl-2H-pyran-2-one 0.4177863333 mM N.D. +0.2 -0.3 -0.2 -0.2
stress copper (II) chloride 1 mM N.D. -0.3 +0.3 -0.3 -0.2
r2a-hepes control R2A-HEPES control for volatile experiments N.D. +0.2 -0.2 -0.4 -0.1
lb LB N.D. +0.1 -0.6 +0.1 -0.0
nutrient Min media with glucose N.D. +0.2 -0.6 -0.1 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.2 -0.5 +0.3 +0.1
nitrogen source L-Leucine (N) N.D. -0.5 +0.5 +0.1 -0.2
stress D-Cycloserine 0.05 mg/ml N.D. -0.2 -0.4 +0.5 -0.0
stress Sisomicin 0.004 mg/ml N.D. -0.3 -0.2 +0.3 +0.1
nutrient L-Lysine N.D. +0.1 -0.3 -0.2 +0.4
stress 3-octanone 2.655166667 mM N.D. +0.2 +0.3 -0.1 -0.3
nitrogen source L-Arginine (N) N.D. -0.5 +0.0 +0.5 +0.2
nitrogen source Cytosine (N) N.D. -0.4 +0.3 +0.4 -0.0
nitrogen source L-Histidine (N) N.D. -0.2 +0.6 -0.0 -0.1
stress Cisplatin 0.001 mg/ml N.D. -0.2 +0.6 -0.2 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.2 -0.4 +0.6 +0.2
stress perchlorate 10 mM N.D. -0.2 +0.2 +0.4 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.2 +0.1 +0.4 -0.1
nitrogen source nitrate (N) N.D. -0.2 +0.5 +0.0 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.1 +0.3 +0.4 -0.1
stress Cisplatin 0.0005 mg/ml N.D. -0.5 +0.6 +0.5 +0.1
stress Aluminum chloride N.D. +0.1 +0.1 +0.3 +0.5
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