Fitness for 5 genes in Sinorhizobium meliloti 1021

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500 ntSMc03204 and SMc03205 are separated by 384 nucleotidesSMc03205 and SMc03206 are separated by 163 nucleotidesSMc03206 and SMc03207 are separated by 11 nucleotidesSMc03207 and SMc03208 are separated by 80 nucleotides SMc03204: SMc03204 - Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data), at 3,168,434 to 3,169,828 SMc03204 SMc03205: SMc03205 - formyltetrahydrofolate deformylase, at 3,170,213 to 3,171,097 SMc03205 SMc03206: SMc03206 - maleylacetoacetate isomerase (glutathione transferase zeta 1) protein, at 3,171,261 to 3,171,914 SMc03206 SMc03207: SMc03207 - aromatic amino acid degradation protein, at 3,171,926 to 3,172,942 SMc03207 SMc03208: SMc03208 - homogentisate 1,2-dioxygenase, at 3,173,023 to 3,174,384 SMc03208
Group Condition SMc03204 SMc03205 SMc03206 SMc03207 SMc03208
carbon source L-Leucine (C) -2.9 N.D. -0.1 +0.0 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.2 N.D. -0.2 -0.8 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 N.D. -0.0 -0.8 -0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 N.D. -0.5 -0.2 -0.1
stress 6-Pentyl-2H-pyran-2-one 0.4177863333 mM -0.9 N.D. +0.2 -0.3 -0.2
volatiles R2A-HEPES with volatiles from Trichoderma atroviridae IMI -0.6 N.D. -0.1 -0.2 -0.0
stress Cobalt chloride 0.16 mM -0.3 N.D. -0.3 -0.4 +0.0
carbon source Myristic (C) +0.1 N.D. -0.2 -0.6 -0.1
stress D-Cycloserine 0.05 mg/ml -0.6 N.D. -0.2 -0.4 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 N.D. -0.2 -0.5 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 N.D. +0.1 -0.2 +0.1
nitrogen source L-Leucine (N) -0.7 N.D. -0.5 +0.5 +0.1
stress copper (II) chloride 1 mM -0.3 N.D. -0.3 +0.3 -0.3
pH LB, pH7 -0.5 N.D. +0.2 -0.4 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 N.D. +0.2 -0.4 +0.6
nitrogen source L-Glutamine (N) -0.3 N.D. -0.2 +0.3 -0.2
nitrogen source NAG (N) -0.5 N.D. -0.3 +0.3 +0.0
nutrient Min media with glucose +0.3 N.D. +0.2 -0.6 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 N.D. +0.1 +0.3 +0.4
stress Cisplatin 0.001 mg/ml -0.3 N.D. -0.2 +0.6 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 N.D. +0.2 +0.1 +0.4
stress perchlorate 10 mM -0.4 N.D. -0.2 +0.2 +0.4
stress Cisplatin 0.0005 mg/ml -0.5 N.D. -0.5 +0.6 +0.5
nitrogen source L-Arginine (N) +0.2 N.D. -0.5 +0.0 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 N.D. +0.3 -0.3 -0.1
nitrogen source Cytosine (N) +0.1 N.D. -0.4 +0.3 +0.4
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.6 N.D. +0.3 -0.2 -0.3
nitrogen source nitrate (N) +0.4 N.D. -0.2 +0.5 +0.0
stress Polymyxin B sulfate 0.00005 mg/ml +0.8 N.D. +0.1 -0.2 +0.2
stress Aluminum chloride +0.7 N.D. +0.1 +0.1 +0.3
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