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Protein
Homologs
Fitness for 5 genes in
Sinorhizobium meliloti 1021
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500 nt
SMc03204 and SMc03205 are separated by 384 nucleotides
SMc03205 and SMc03206 are separated by 163 nucleotides
SMc03206 and SMc03207 are separated by 11 nucleotides
SMc03207 and SMc03208 are separated by 80 nucleotides
SMc03204: SMc03204 - Dihydrolipoyl dehydrogenase (EC 1.8.1.4)
(from data)
, at 3,168,434 to 3,169,828
SMc03204
SMc03205: SMc03205 - formyltetrahydrofolate deformylase, at 3,170,213 to 3,171,097
SMc03205
SMc03206: SMc03206 - maleylacetoacetate isomerase (glutathione transferase zeta 1) protein, at 3,171,261 to 3,171,914
SMc03206
SMc03207: SMc03207 - aromatic amino acid degradation protein, at 3,171,926 to 3,172,942
SMc03207
SMc03208: SMc03208 - homogentisate 1,2-dioxygenase, at 3,173,023 to 3,174,384
SMc03208
Group
Condition
SMc03204
SMc03205
SMc03206
SMc03207
SMc03208
carbon source
L-Leucine (C)
-2.9
N.D.
-0.1
+0.0
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant
-0.2
N.D.
-0.2
-0.8
-0.5
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.4
N.D.
-0.0
-0.8
-0.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.5
N.D.
-0.5
-0.2
-0.1
stress
6-Pentyl-2H-pyran-2-one 0.4177863333 mM
-0.9
N.D.
+0.2
-0.3
-0.2
volatiles
R2A-HEPES with volatiles from Trichoderma atroviridae IMI
-0.6
N.D.
-0.1
-0.2
-0.0
stress
Cobalt chloride 0.16 mM
-0.3
N.D.
-0.3
-0.4
+0.0
carbon source
Myristic (C)
+0.1
N.D.
-0.2
-0.6
-0.1
stress
D-Cycloserine 0.05 mg/ml
-0.6
N.D.
-0.2
-0.4
+0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.3
N.D.
-0.2
-0.5
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.7
N.D.
+0.1
-0.2
+0.1
nitrogen source
L-Leucine (N)
-0.7
N.D.
-0.5
+0.5
+0.1
stress
copper (II) chloride 1 mM
-0.3
N.D.
-0.3
+0.3
-0.3
pH
LB, pH7
-0.5
N.D.
+0.2
-0.4
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.8
N.D.
+0.2
-0.4
+0.6
nitrogen source
L-Glutamine (N)
-0.3
N.D.
-0.2
+0.3
-0.2
nitrogen source
NAG (N)
-0.5
N.D.
-0.3
+0.3
+0.0
nutrient
Min media with glucose
+0.3
N.D.
+0.2
-0.6
-0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
-0.9
N.D.
+0.1
+0.3
+0.4
stress
Cisplatin 0.001 mg/ml
-0.3
N.D.
-0.2
+0.6
-0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
-0.8
N.D.
+0.2
+0.1
+0.4
stress
perchlorate 10 mM
-0.4
N.D.
-0.2
+0.2
+0.4
stress
Cisplatin 0.0005 mg/ml
-0.5
N.D.
-0.5
+0.6
+0.5
nitrogen source
L-Arginine (N)
+0.2
N.D.
-0.5
+0.0
+0.5
agar plate interaction control
Parafilmed volatile agar plate with no fungus
+0.3
N.D.
+0.3
-0.3
-0.1
nitrogen source
Cytosine (N)
+0.1
N.D.
-0.4
+0.3
+0.4
in planta
Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
+0.6
N.D.
+0.3
-0.2
-0.3
nitrogen source
nitrate (N)
+0.4
N.D.
-0.2
+0.5
+0.0
stress
Polymyxin B sulfate 0.00005 mg/ml
+0.8
N.D.
+0.1
-0.2
+0.2
stress
Aluminum chloride
+0.7
N.D.
+0.1
+0.1
+0.3
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